Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g914 ATGGAATTAAACCGTTTGAACCGACGTGCTGTGATACTGGTATTCAAATTCGTACACTCAATCATCTGGGTTCCATGGAGGATCCAACAACACTTCAGGACTCAGGGCATCGGCGGCCCAGGGTACCGACCCATTTCAGGAAACGTGGGCGAGTTCCAGCGTATGTACTCGGAGGCTCAGTCGAAATCAATGAGTGGATTGCAGCATGACATACTTCACCGGGTGCTTCCGCACTACTCCAGGTGGTCAGGCGCTTACGGGAAGACGTTTATTTGGTGGTTAGGGACAAAGCCCAGGCTGGCTCTAGCAGATCCGGAGTCGATTAAGGAGGTTTTCCTCAAAGCAGGTGTGTCCTATGATAAGGCTAGGTTTAACCCCTTGTCTAAGCTGCTGTTTGCAGATGGACTTGTTGCGTTGAACGGTGAGAAGTGGGCTCTTCATAGAAGAATCACGAATCAGGCTTTCAATACGGAGACAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACTAGTAAGATGTTGGAAGAGTGGGAGGAAGCAAGAAGGGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAGCTGCAAAATCTTTCTGCAGACATTATATCCAGAACGGCTTTTGGGAGCAGTTTCCAAGAGGGAAAATGCATTTTTGAACTACAAGAACAGCAAACCCACCTCGTCGTCCAGGCTTTGAGAAGTATCTACATTCCTGGCTTCAGATATTTGCCCACTAAAAAGAATAGAGAAAGGTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACGAAAGAGAATTCTAAAAATCTAGTCAGTCTACTGTTGTCTGCCTTCAAGAATCAGCACGGTGAAGAAGAGAGATTAACAGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGTAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTTCCTCTGCAGACAATTTAAGCAAGCTCAAGACTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTGTCCAAACCATGTCAAGGGTACCGCCAAAAAATGTGAAGTTAGGAAGGTTAGATGTTCCTGCAGGCACACAGATCTCTTTGGCCATGACCGCTGTTCATCATGACACTCAAATATGGGGTGAAAATGCTAATGAATTCAACCCCTTCAGATTTAAGGAGCCTCGGAAGCAATTAGGCTCATTTTTCCCATTTGGGTTAGGCCCCAGGATATGCATAGGTCAAAATTTTGCGATGGTTGAGGTGAAAATTGTCCTAGCCATGATCATCCAACAATATTCCTTTGTCTTATCTCCAACATATGTTCATGCCCCAACGCAAATCTTTACCCTGCAGCCCCAGTACGGTGCCCACATCCTCTTTACAAGGATTTGA 1506 45.42 MELNRLNRRAVILVFKFVHSIIWVPWRIQQHFRTQGIGGPGYRPISGNVGEFQRMYSEAQSKSMSGLQHDILHRVLPHYSRWSGAYGKTFIWWLGTKPRLALADPESIKEVFLKAGVSYDKARFNPLSKLLFADGLVALNGEKWALHRRITNQAFNTETVKGWVPEIVASTSKMLEEWEEARRGRDELEREVHRELQNLSADIISRTAFGSSFQEGKCIFELQEQQTHLVVQALRSIYIPGFRYLPTKKNRERWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSAFKNQHGEEERLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSSSADNLSKLKTVGMIINETLRLYPPVQTMSRVPPKNVKLGRLDVPAGTQISLAMTAVHHDTQIWGENANEFNPFRFKEPRKQLGSFFPFGLGPRICIGQNFAMVEVKIVLAMIIQQYSFVLSPTYVHAPTQIFTLQPQYGAHILFTRI* 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10363406 10370119 - Vvi18g914 Vvi18g914 780617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g914 501 SUPERFAMILY Cytochrome P450 66 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vvi18g914 501 Coils Coil 257 277 - -
Vvi18g914 501 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 9 496 - -
Vvi18g914 501 Pfam Cytochrome P450 81 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 Gene3D Cytochrome P450 43 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 496 - -
Vvi18g914 501 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g914 501 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g914 - - vvi:100262602 984.941