Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g915 ATGATCATTCAACAATATCCATTTATGTTATCATCAACATATGTTCATGCCCCCAATGCAAATCTTGGGCTTGCAATCTTAGTACGATGCCCACATCCTCTTTACAAAGATCTGAAGTTGATAAATTTTCACTTTTTTACACACATGACAAATTTCTGTGAAACATTTTCCTCCAATTTATTTGGAATTTCGTGGTCCGGCGCTTACGGGAAGACGTTTATTTGGTGGTTCGGGACAAAGCCCCGGCTGGCTCTAGCCGATCCGGAGTCGATTAAGGAGGTTCTCCTAAACACAGGTGTGTCCTATGATAGGGTTGGGTTTAGTCCCCTGTCTAGGCCGCTGTTTGGAGATGGACTTGCCGCGTTGAAGGGTGAGAAGTGGGCTCTTCATAGAAGAATCGCGAACCGGGCCTTCAACATGGAGAGAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACCAGAAAGATGTTGGAAGAGTGGGAGGAAGCTAGAGGAGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAACTGCAAAATCTTTCTGCAGACGTTATATCTAGAACGGCTTTTGGGAGCAGTTTTCAAGAGGGAAAACACATTTTTGAACTACAAGAACAGCAAATGCACCTTATCGCCAAGGCTCTAAGAAGTATCCACATTCCTGGCTTCAGATACTTGCCCACTAAAACGAATAGAGAAAGTTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACAAAAGAGAATTCTAAAAATCTAGTCAGTCTATTATTGTCAACCTACAAGAATCAGCATGGTGAAGAAGAGAAATTGACCGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGAAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTCCCTTTGCAGATAATTTAAGCGAGCTCAAGATTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTGCCCAACCCATGTCAAGGGTACCAACAAAAAGTGTAAAGTTAGGAAGGGTAGATATTCCTGCAGGCACACAAATCTTTGCGACTATGACTGCTGTTCATCATGACACTCAAATATGGGGTGAAGATGCTAATGAATTCAACCCTTTTAGATTTAAGGAGCCTAGGAAGCAATTAGCCTCATTTTTCCCTTTTGGGTTGGGCCCCAGGATATGTGTAGGTCAAAATTTGGCGATGGTTGAGGCAAAAATTATCCTAGCCATGATCATCCAACAATATTCCTTTGTGTTATCTCCAACATATGTTCATGCCCCAATGCAGAGCTTGTCCTTGCATCCCCAGTATGGTGCCCACATCCACTTTACAAGGATTTGA 1455 42.96 MIIQQYPFMLSSTYVHAPNANLGLAILVRCPHPLYKDLKLINFHFFTHMTNFCETFSSNLFGISWSGAYGKTFIWWFGTKPRLALADPESIKEVLLNTGVSYDRVGFSPLSRPLFGDGLAALKGEKWALHRRIANRAFNMERVKGWVPEIVASTRKMLEEWEEARGGRDELEREVHRELQNLSADVISRTAFGSSFQEGKHIFELQEQQMHLIAKALRSIHIPGFRYLPTKTNRESWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSTYKNQHGEEEKLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSPFADNLSELKIVGMIINETLRLYPPAQPMSRVPTKSVKLGRVDIPAGTQIFATMTAVHHDTQIWGEDANEFNPFRFKEPRKQLASFFPFGLGPRICVGQNLAMVEAKIILAMIIQQYSFVLSPTYVHAPMQSLSLHPQYGAHIHFTRI* 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10370552 10376406 - Vvi18g915 Vvi18g915 780618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g915 484 Coils Coil 240 260 - -
Vvi18g915 484 SUPERFAMILY Cytochrome P450 60 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PANTHER CYTOCHROME P450 FAMILY MEMBER 64 479 - -
Vvi18g915 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vvi18g915 484 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 Gene3D Cytochrome P450 43 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 Pfam Cytochrome P450 67 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g915 484 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 64 479 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g915 - - vvi:100266129 851.662