Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g916 ATGGGTGGATTGCAGCATGACATACTTCATCGAGTGCTTCCTTACTACTCCAGGTGGTCAGGCGCTTACGGGAAGACGTTTATTTGGTGGGTCGGGACAAAGCCGCGGCTGGCTCTAGCCGATCCGGAGCCCATTAAGGAGGTTTTCCTAAACACAGGTGTGTCCTATGATAAGGTTGGGTTTAGTCCCCTGACTAGGCCACTGTTTGGAGATGGGCTTGGTGGGTTGAATGGTGAGAAGTGGGCTCTTCATAGAAGAATCACGAACCAGGCTTTCAACATGGAGAGAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACTAGAAAGATGTTGGAAGAGTGGGAGGAAGTAAGAAGAGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAACTGCAAAATCTTTCTGCAGACATTATATCTAGAACTGCTTTTGGGAGCAGTTTCCAAGAGGGAAAACACATTTTTGAACTACAAGAACAGCAAATGCACCTTATCGCCAAGGCTCTAAGAAGTATCCACATTCCTGGCTTCAGATACTTGCCCACTAAAACGAATAGAGAAAGTTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACTAAAGAGAATTCTAAAAATCTAGTCAGTCTATTATTGTCAACCTACAAGAATCAGCATGGTGAAGAAGAGAAATTGACCGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGTAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTCCCTCTGCAGATAATTTAAGGGAGCTCAAGATTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTACCCAGACCATGTCAAGGGTATCAACAAAAAATGTAATGTTAGGAAGGGTAGATGTTCCCGCAGGCACAGAAATCTATTCGGCTATGATTGGTGTTCATCATGACACTCAAATATGGGGTGAAGATGCTAATGAATTCAACCCCTTAAGATTTAAGGAGCCTCGGAATCAATTAGGCTCATTTTTCCCATTTGGGTTAGGCCCCAGGATATGCATAGGTCAAAATTTCGCAATGATGGAGGCGAAAATTGTCCTAGCCATGATCATTCAACAATATTCCTTTGTGTTATCACCAACATATGTTCATGCCCCAACGCAGATCTTGACCTTGCAGCCCCAGTACGGTGCCCACATCCTCTTTACAAGGATTTGA 1317 43.89 MGGLQHDILHRVLPYYSRWSGAYGKTFIWWVGTKPRLALADPEPIKEVFLNTGVSYDKVGFSPLTRPLFGDGLGGLNGEKWALHRRITNQAFNMERVKGWVPEIVASTRKMLEEWEEVRRGRDELEREVHRELQNLSADIISRTAFGSSFQEGKHIFELQEQQMHLIAKALRSIHIPGFRYLPTKTNRESWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSTYKNQHGEEEKLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSPSADNLRELKIVGMIINETLRLYPPTQTMSRVSTKNVMLGRVDVPAGTEIYSAMIGVHHDTQIWGEDANEFNPLRFKEPRNQLGSFFPFGLGPRICIGQNFAMMEAKIVLAMIIQQYSFVLSPTYVHAPTQILTLQPQYGAHILFTRI* 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10381790 10384308 - Vvi18g916 Vvi18g916 780619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g916 438 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 2 433 - -
Vvi18g916 438 Coils Coil 194 214 - -
Vvi18g916 438 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS P450 superfamily signature 377 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 379 388 IPR017972 GO:0005506|GO:0016705
Vvi18g916 438 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 433 - -
Vvi18g916 438 SUPERFAMILY Cytochrome P450 8 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS E-class P450 group I signature 20 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS E-class P450 group I signature 136 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS E-class P450 group I signature 240 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS E-class P450 group I signature 260 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS E-class P450 group I signature 376 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 PRINTS E-class P450 group I signature 386 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 Pfam Cytochrome P450 16 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g916 438 Gene3D Cytochrome P450 4 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g916 - - vvi:100250571 891.723