Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi18g916 | ATGGGTGGATTGCAGCATGACATACTTCATCGAGTGCTTCCTTACTACTCCAGGTGGTCAGGCGCTTACGGGAAGACGTTTATTTGGTGGGTCGGGACAAAGCCGCGGCTGGCTCTAGCCGATCCGGAGCCCATTAAGGAGGTTTTCCTAAACACAGGTGTGTCCTATGATAAGGTTGGGTTTAGTCCCCTGACTAGGCCACTGTTTGGAGATGGGCTTGGTGGGTTGAATGGTGAGAAGTGGGCTCTTCATAGAAGAATCACGAACCAGGCTTTCAACATGGAGAGAGTTAAGGGGTGGGTGCCGGAAATTGTGGCAAGTACTAGAAAGATGTTGGAAGAGTGGGAGGAAGTAAGAAGAGGGAGGGATGAATTGGAAAGGGAAGTGCATAGAGAACTGCAAAATCTTTCTGCAGACATTATATCTAGAACTGCTTTTGGGAGCAGTTTCCAAGAGGGAAAACACATTTTTGAACTACAAGAACAGCAAATGCACCTTATCGCCAAGGCTCTAAGAAGTATCCACATTCCTGGCTTCAGATACTTGCCCACTAAAACGAATAGAGAAAGTTGGAGAATAGAGAAGGAAATTGAAGAATCAATACAAAGGCTGATAGACAATAACAACAAAACTAAAGAGAATTCTAAAAATCTAGTCAGTCTATTATTGTCAACCTACAAGAATCAGCATGGTGAAGAAGAGAAATTGACCGTGCAAGAAGTTATAGACGAATGCAAGACCTTCTACTTTGCAGGAAAGGAAACAACTGGTAATCTTTTGACTTGGGCACTTGTCCTTTTAGCAATGCATCAAGAATGGCAAACCAAGGCACGAGAAGAAGTGGTCCAAGTCTATGGCCACACCATGTCTCCCTCTGCAGATAATTTAAGGGAGCTCAAGATTGTGGGCATGATAATCAATGAAACACTTCGACTCTATCCCCCTACCCAGACCATGTCAAGGGTATCAACAAAAAATGTAATGTTAGGAAGGGTAGATGTTCCCGCAGGCACAGAAATCTATTCGGCTATGATTGGTGTTCATCATGACACTCAAATATGGGGTGAAGATGCTAATGAATTCAACCCCTTAAGATTTAAGGAGCCTCGGAATCAATTAGGCTCATTTTTCCCATTTGGGTTAGGCCCCAGGATATGCATAGGTCAAAATTTCGCAATGATGGAGGCGAAAATTGTCCTAGCCATGATCATTCAACAATATTCCTTTGTGTTATCACCAACATATGTTCATGCCCCAACGCAGATCTTGACCTTGCAGCCCCAGTACGGTGCCCACATCCTCTTTACAAGGATTTGA | 1317 | 43.89 | MGGLQHDILHRVLPYYSRWSGAYGKTFIWWVGTKPRLALADPEPIKEVFLNTGVSYDKVGFSPLTRPLFGDGLGGLNGEKWALHRRITNQAFNMERVKGWVPEIVASTRKMLEEWEEVRRGRDELEREVHRELQNLSADIISRTAFGSSFQEGKHIFELQEQQMHLIAKALRSIHIPGFRYLPTKTNRESWRIEKEIEESIQRLIDNNNKTKENSKNLVSLLLSTYKNQHGEEEKLTVQEVIDECKTFYFAGKETTGNLLTWALVLLAMHQEWQTKAREEVVQVYGHTMSPSADNLRELKIVGMIINETLRLYPPTQTMSRVSTKNVMLGRVDVPAGTEIYSAMIGVHHDTQIWGEDANEFNPLRFKEPRNQLGSFFPFGLGPRICIGQNFAMMEAKIVLAMIIQQYSFVLSPTYVHAPTQILTLQPQYGAHILFTRI* | 439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 10381790 | 10384308 | - | Vvi18g916 | Vvi18g916 | 780619 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi18g916 | 438 | PANTHER | CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 | 2 | 433 | - | - | |
Vvi18g916 | 438 | Coils | Coil | 194 | 214 | - | - | |
Vvi18g916 | 438 | PRINTS | P450 superfamily signature | 251 | 268 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | P450 superfamily signature | 304 | 315 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | P450 superfamily signature | 377 | 386 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 379 | 388 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi18g916 | 438 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 2 | 433 | - | - | |
Vvi18g916 | 438 | SUPERFAMILY | Cytochrome P450 | 8 | 437 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | E-class P450 group I signature | 20 | 39 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | E-class P450 group I signature | 136 | 154 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | E-class P450 group I signature | 240 | 257 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | E-class P450 group I signature | 260 | 286 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | E-class P450 group I signature | 376 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | PRINTS | E-class P450 group I signature | 386 | 409 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | Pfam | Cytochrome P450 | 16 | 416 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi18g916 | 438 | Gene3D | Cytochrome P450 | 4 | 437 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi18g916 | - | - | vvi:100250571 | 891.723 |