Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi18g919 | ATGGGCTGGATTCGGATTACCAGGCTTGGGCGGTGGCTGCGGATCGTTGCTCAGGTAAATCAGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGTCATGAAACAGATAAGAACATTGAGATATGGAAGATCAAAAAGTTGATCAAGGCACTGGAAGCTGCTCGAGGCAACGGGACAAGCATGATTTCTCTTATCATGCCTCCGCGGGATCAAATATCAAGGGTTACTAAGATGCTGGGAGATGAGTTTGGCACAGCTTCAAACATTAAAAGCAGGGTGAATCGTCAATCTGTTTTGGGAGCAATCACATCTGCACAGCAAAGATTGAAGTTGTACAACAAGGTTCCTCCCAATGGGCTTGTGCTGTACACTGGTACTATTGTGACAGAAGATGGAAAGGAGAAGAAGGTGACTATTGACTTTGAGCCTTTTAGGCCTATAAATGCTTCCCTTTACCTATGTGACAACAAATTCCATACAGAAGCATTGAATGAACTTTTGGAATCTGATGACAAGTTTGGTTTTATTGTTATGGATGGAAATGGTACCCTCTTTGGCACATTAAGTGGCAATACTCGTGAGGTGCTTCATAAATTTACTGTTGACCTCCCAAAGAAACATGGAAGAGGCGGGCAATCAGCACTACGGTTTGCTCGTCTTCGAATGGAGAAGCGTCACAACTATGTGAGGAAGACAGCAGAGCTTGCTACACAATTTTTTATCAATCCTGCCACTAGCCAGCCCAATGTTGCAGGATTAATACTGGCTGGCTCAGCTGACTTCAAGACTGAGCTGAGTCAGTCTGACATGTTTGATCCCCGTCTTCAGGCCAAAATACTTAATGTAGTGGATGTTTCTTATGGAGGGGAGAATGGTTTCAATCAGGCAATCGAGTTGTCCTCAGAGATCTTATCCAATGTGAAGTTCATTCAGGAGAAGCGCTTGATTGGTAAATACTTTGAGGAGATCAGTCAGGACACTGGAAAGTATGTCTTTGGTGTGGAAGATACACTGAAAGCTTTGGAGATGGGTGCTGTTGAGATACTGATTGTGTGGGAGAATCTGGACATGAATAGGTATGAAAAGATGTCATTGCTAGAGTGGTTTGCCAATGAGTACAAGCGCTTTGGTTGTACACTTGAGTTTGTCACCAACAAATCACAAGAGGGATCCCAGTTCTGCAGGGGCTTTGGTGGGATTGGTGGAATCCTCCGTTACCAGCTAGACATGCGATCATTTGATGAGCTTTCTGATGATGGAGAAAACTACGATGATTCTGAATAG | 1293 | 43.93 | MGWIRITRLGRWLRIVAQVNQLASTVSTVLTMADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVEILIVWENLDMNRYEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDELSDDGENYDDSE* | 431 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 10428995 | 10432146 | + | Vvi18g919 | Vvi18g919 | 780622 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi18g919 | 430 | SUPERFAMILY | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 37 | 171 | IPR024049 | - | |
Vvi18g919 | 430 | Pfam | eRF1 domain 1 | 49 | 169 | IPR005140 | - | |
Vvi18g919 | 430 | SUPERFAMILY | Translational machinery components | 173 | 307 | - | - | |
Vvi18g919 | 430 | Gene3D | eRF1 domain 2 | 167 | 308 | IPR042226 | - | |
Vvi18g919 | 430 | Pfam | eRF1 domain 2 | 175 | 308 | IPR005141 | - | |
Vvi18g919 | 430 | TIGRFAM | aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms | 43 | 363 | IPR004403 | GO:0003747|GO:0006415 | |
Vvi18g919 | 430 | Pfam | eRF1 domain 3 | 312 | 411 | IPR005142 | - | |
Vvi18g919 | 430 | Gene3D | - | 310 | 363 | IPR029064 | - | |
Vvi18g919 | 430 | Gene3D | - | 364 | 430 | IPR029064 | - | |
Vvi18g919 | 430 | PANTHER | EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE | 32 | 363 | - | - | |
Vvi18g919 | 430 | PANTHER | EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE | 364 | 430 | - | - | |
Vvi18g919 | 430 | Gene3D | eRF1 domain 1 | 30 | 166 | IPR024049 | - | |
Vvi18g919 | 430 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 32 | 363 | IPR004403 | GO:0003747|GO:0006415 | |
Vvi18g919 | 430 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 364 | 430 | IPR004403 | GO:0003747|GO:0006415 | |
Vvi18g919 | 430 | SUPERFAMILY | L30e-like | 309 | 413 | IPR029064 | - | |
Vvi18g919 | 430 | SMART | eRF1_1_2 | 35 | 171 | IPR005140 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi18g919 | K03265 | - | vvi:100248954 | 761.14 |