Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g927 ATGAGGAAGCTGTGTCCGAATTTTGACAAAGAAAATGGGCTGGAGACAGTGCTGGAGGTGCCCATTCCAGAGGAGATGTTCAAGAGCATGGGCAGCAATGTGGCCCTGAGATGGCAGAACATGCGTGCTTTCATGAAGGGGCAATGTATAGATAAGGCTTCCCGCCTGTCGGATGGATGTGGCCCTGAGTTTCGGTTATTGCTTAAACTTGTTGGCTCTCCTCTTATCCCCGTTCAGGTTCCCTTGGAGTATGGAGCTACTTTCCCTATCAAAGATTGTTCTATTGAAGCTTCGACGGCAAAGTATATAGTGCAACAATACATAGCGGCAACGGGAGGGTGGGCAGCATTAAATGCAGTGCACAGCATGTACGCGGTGGGGCAGGTCAGGATGATATCATCGGATATGAGCGAGGGCGAGGAAAGAGTCGACCCCAAAGGCAACGGTGAAGTTGGTGGGTTCGTCCTCTGGCAAAAGAATCCCGACTTGTGGTACCTTGAACTCGTTGTTTCCGGTTGCAAGGTCAGCGCCGGTAGTGACGGAAAAGTAGCCTGGGGTCAGACCTCCTCTCAAGCGTCTCACGCTAACAGAGGCCCTCCAAGGCCTTTGCGCCGCTTCTTTCAGGGGTTGGACCCCAGGTTTACAGCCAACCTATTCCTAGACGCAGTGTGCATTGGAGAGAAGACCATCAACAATGAAGACTGTTTCATTCTGAAGATGGAGACGAGCGCCAGCGTCCTCAAGGGGCAGAGCACGCCCAAAACGGAAATCGTTCACCATACCGTGTGGGGATACTTCAGCATGCGAACTGGGCTGCTCATACAGTTCGAGGACACAAAGCTAGTAAGAATGAAGGCTGTCAAGGGAGAAGAGAGCGTGTTCTGGGAAACGAGTCTGGAATCCGTGATCGAGGACTACAGATACGTGGACGGCATCAATATAGCCCACGGCGGTAAGACCACTGCGACTCTGTACAGATACGGAGAGGCGTCAAACCACAAGAGAAGGATTGAGGAGACGTGGGGCATTGAAGAGATTGATTTCAATATATGCGGTTTGACGATGGAGTCCTTTCTGCCCCCTGCTGATCTCAAGATATATCAGGACGGTGGGAACTATAGATCAGAGACATTTGATTTGGAGAAGGCAAATGATGAAAATAGTCTTATCCTACACTCTGAAGTTAATGTAGACTATAACTCCGCTTATTATCTGATGCCTTCTATCTCCTGGTTAAGAATCCAAGTATTTTCCTTTATTCTTTTTTCTTTTCTGTTTTTTTCTCTGAAAATAAATTTCATCGTTTTTACATTTTTGCTTAAAAGAACTCGATGA 1335 48.09 MRKLCPNFDKENGLETVLEVPIPEEMFKSMGSNVALRWQNMRAFMKGQCIDKASRLSDGCGPEFRLLLKLVGSPLIPVQVPLEYGATFPIKDCSIEASTAKYIVQQYIAATGGWAALNAVHSMYAVGQVRMISSDMSEGEERVDPKGNGEVGGFVLWQKNPDLWYLELVVSGCKVSAGSDGKVAWGQTSSQASHANRGPPRPLRRFFQGLDPRFTANLFLDAVCIGEKTINNEDCFILKMETSASVLKGQSTPKTEIVHHTVWGYFSMRTGLLIQFEDTKLVRMKAVKGEESVFWETSLESVIEDYRYVDGINIAHGGKTTATLYRYGEASNHKRRIEETWGIEEIDFNICGLTMESFLPPADLKIYQDGGNYRSETFDLEKANDENSLILHSEVNVDYNSAYYLMPSISWLRIQVFSFILFSFLFFSLKINFIVFTFLLKRTR* 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10519589 10523508 + Vvi18g927 Vvi18g927 780630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g927 444 Pfam Protein of unknown function (DUF620) 123 361 IPR006873 -
Vvi18g927 444 PANTHER LIPASE 1 365 IPR006873 -
Vvi18g927 444 PANTHER DUF620 FAMILY PROTEIN (DUF620) 1 365 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g377 Vvi18g927 ECH
Vvi4g947 Vvi18g927 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g927 - - vvi:100257372 760.755