Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g979 ATGGAGTTGGATGAGATCAAAAGGAGCATGCTGAATCTTTTGCCTAATGCCACTCTCCAGCTTTGCTGTTACACAGTGGTGCTCATCGTCTCGTTGATGTGGTTGATGCGTGGGATAGCCAGGGTCTTGCGTGACTCTCATTGGGAATCAACTGCCAAGATTCCTCCCGGGAGTAGAGGACTACCCTTGATCGGAGAAACTCTGCACTTCATGGCTGCCACCAGCTCTTCCAAAGGCTTCTATGACTTTGTTCATATTCGTCAACTCCGGTATGGAAACTGTTTTAGGACCAGCATATTTGGGCAGACTCATGTTTTTGTTTCAAGCACGGAGTCGGCAAAAGTGGTACTGAACAATGAAGTGGGGAAGTTCACAAAGAGATACATAAAATCAATCGCAGAGCTAGTGGGAAATGAGAGCCTACTGTGTGCATCTCATCAGCACCACAAATTGATCCGTGGTCGTCTGATCAATCTCTTCTCTACTGCTTCCATTTCCTCATTTATCAAACAGTTTGATCAACTGATTGTCACTACTCTCAGTGGCTGGGAACACAAACCCACTGTGGTTGTGCTCCATGAAGCTCTTGAGCTAATCTGTAAAGCCATGTGCAAGATGTTGATGAGTTTAGAGAGCGGAGATGAAGTAGAGATGCTGCAAAAGGATGTTGCCCATGTTTGTGAAGCAATGATTGCCTTCCCTTTGAGGCTACCCTGCACTCGATTCTATAAAGGCCTTGAGGCAAGAAAAAGAGTAATGAAAATGCTGGAGAAGAAAATCGAGGAAAGGAGAAGAGGAGAAGCCTATCATGAAGACTTTCTACAACATCTCCTGAAAGACAATGGTAGTGCCTGTTGTGATGAAGTCCCACCCTTAACGGATGCAGAGATCCAAGACAACATTTTAACCATGATAATTGCAGGCCAGGATACAACAGCAAGTGCAATCACTTGGATGGTGAAGTACCTGGACGAGAACCAACAGGTCCTCCACACACTCAGAGCAGAGCAAGGCCGAATTGCAGAAAAAACTTCACACACCTCGTCTCTTACACTGGATGATCTTAATGAGATGCCATATGCTTCTAAGGTGGTGAAAGAATCGTTAAGGATGGCATCTATAGTAGCATGGCTCCCAAGAGTAGCCCTCCAGGACTGTGAGGTTCAAGGGTTTAAGATCAAGAAGGGGTGGAACATCAATATCGATGCTAGATCTATACATCTTGATCCTACGTTGTACAACAATCCCACCATGTTCATTCCTTCCAGGTTTGATGGTGAACCAAAGCCAAATAGCTTTTTAGCTTTCGGAACTGGGGGGAGGACATGCCTGGGAATGAACATGGCTAAAGCCATGATGCTAGTCTTTCTGCACCGCCTGATTACCACTTACAACTGGACGGTAGTGAACCCGGATTCAAGCATCGAGAAGTGGGCTCTATTCTCGAGACTAAAAAGCGGCTGCCCCATTCATGTTAGCCCGATTGCAAAGGATGCAGCGGACGCGTAA 1509 45.99 MELDEIKRSMLNLLPNATLQLCCYTVVLIVSLMWLMRGIARVLRDSHWESTAKIPPGSRGLPLIGETLHFMAATSSSKGFYDFVHIRQLRYGNCFRTSIFGQTHVFVSSTESAKVVLNNEVGKFTKRYIKSIAELVGNESLLCASHQHHKLIRGRLINLFSTASISSFIKQFDQLIVTTLSGWEHKPTVVVLHEALELICKAMCKMLMSLESGDEVEMLQKDVAHVCEAMIAFPLRLPCTRFYKGLEARKRVMKMLEKKIEERRRGEAYHEDFLQHLLKDNGSACCDEVPPLTDAEIQDNILTMIIAGQDTTASAITWMVKYLDENQQVLHTLRAEQGRIAEKTSHTSSLTLDDLNEMPYASKVVKESLRMASIVAWLPRVALQDCEVQGFKIKKGWNINIDARSIHLDPTLYNNPTMFIPSRFDGEPKPNSFLAFGTGGRTCLGMNMAKAMMLVFLHRLITTYNWTVVNPDSSIEKWALFSRLKSGCPIHVSPIAKDAADA* 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10968172 10971522 - Vvi18g979 Vvi18g979 780682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g979 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vvi18g979 502 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PANTHER CYTOCHROME P450 26 26 495 - -
Vvi18g979 502 Gene3D Cytochrome P450 44 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 26 495 - -
Vvi18g979 502 Pfam Cytochrome P450 55 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g979 502 SUPERFAMILY Cytochrome P450 51 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g979 - - vvi:100267651 1010.36