Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18randomg18 ATGGAGTTCTCTTTCAAGTCTGAGTACACAAACTGGTGGGTTTTTACACTTCCAGCTCTTGTGGAAACCCAAAACTTATCCAAGGGTCCGCGAGGTATTCCCATTTTTGGTAGCTTATTCAGCTTAAGCCATGGGTTGGCTCATCGTACACTTGCCTCCATGGCTTTGAGCAGCGCTGCCACTCAGCTCATGGCCTTCAGCCTCGGCTCAACCCCTACAGTAGTTTCTTCCGAGCCTTGCACTGCTAGGGAGATATTGACCTCACCTCAATTCGCTGACCGCCCCATCAAACAGTCAGTTAAGAGCCTTATGTTCAGCCGAGCCATCGGGTTTGCACCTAATGGGGCTTACTGGAGGCTACTGAGAAGAATATCATCGTCTCACCTCTTCGCGCCAAAGCGCATAGCAGCTCACGAAGGTGGACGGCAGCTGGACTGCACCGCCATGTTACAGTCCATTGCAAAAGAACAATCAGCAAATGGGGCTGTTGTTCTGCGGAAGCACCTTCAAGCTGCTGCCCTCAACAATATAATGGGGACAGTTTTCGGAAAAAGGCTTAATCCAGTGGAAGATAGAATGGAGGCTAGAGAATTGCATGAGATTGTCAAAGAAGGCTTCGAGCTTTTGGGAGCTTTCAACTGGTCCGATCATCTGCCGTGGCTGAACTACTTTTATGACCCTTTCGGTATCAACCAGCGTTGCTCCGCTCTTGTTCCTCGAGTCAGAAAACTCGTCAAAGGGATTATTAAAGAACACCAACTCAGTGGTTCCAACAAGCTCTCAGATAAGTCAGATTTCGTAGATGTTTTGCTGTCTCTGGATGGTGAAGAGAAGCTTGAAGAGGAAGATATGGTGGCCGTTTTATGGGAAATGATCTTCAGAGGTACTGATACAACGGCGCTCTTAACTGAGTGGGTCATGGCTGAGTTAATCCTGAACCCCAAGGTTCAAGCCAAGCTTCACGAGGAGCTCCATCTCACTACTCTAGGAAACAAGGCCATCACCGACGCTAACGTGGCTAAATTGCCCTATCTTCAAGCTGTGATCAAGGAGACCCTACGTGTCCACCCACCTGGGCCTCTCCTCTCATGGGCCCGCCTGTCCACGTCAGACGTCCACCTCAGCAATGGCATGGTGATCCCTTCCAACACCACTGCAATGGTCAACATGTGGGCCATCACACATGATCCAAATCTCTGGAAAGACCCTCTGGCCTTCAAGCCAGAGAGGTTTTTACCCTCTGCTGGCGGTGCTGACGTGGACGTGAGAGGCTGTGACTTGCGGCTCGCCCCGTTCGGGGCTGGTCGTAGGGTTTGTCCAGGGAAGAACCTAGGGCTGGTGACAGTGAGCCTTTGGGTGGCTAAGTTGGTGCACCATTTCGACTGGGTTCAGGACATGGCTCAGCCGGTTGACCTGAGTGAGGTGCTGAAGCTGTCATGTGAAATGAAGAACCCTCTCTCTGCTGTGCCTGTTCCCAGGAGTGGTGCAATTCATATATAA 1500 50.93 MEFSFKSEYTNWWVFTLPALVETQNLSKGPRGIPIFGSLFSLSHGLAHRTLASMALSSAATQLMAFSLGSTPTVVSSEPCTAREILTSPQFADRPIKQSVKSLMFSRAIGFAPNGAYWRLLRRISSSHLFAPKRIAAHEGGRQLDCTAMLQSIAKEQSANGAVVLRKHLQAAALNNIMGTVFGKRLNPVEDRMEARELHEIVKEGFELLGAFNWSDHLPWLNYFYDPFGINQRCSALVPRVRKLVKGIIKEHQLSGSNKLSDKSDFVDVLLSLDGEEKLEEEDMVAVLWEMIFRGTDTTALLTEWVMAELILNPKVQAKLHEELHLTTLGNKAITDANVAKLPYLQAVIKETLRVHPPGPLLSWARLSTSDVHLSNGMVIPSNTTAMVNMWAITHDPNLWKDPLAFKPERFLPSAGGADVDVRGCDLRLAPFGAGRRVCPGKNLGLVTVSLWVAKLVHHFDWVQDMAQPVDLSEVLKLSCEMKNPLSAVPVPRSGAIHI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18randomg18 499 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 28 496 - -
Vvi18randomg18 499 SUPERFAMILY Cytochrome P450 29 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PANTHER CYTOCHROME P450 78A7-RELATED 28 496 - -
Vvi18randomg18 499 Gene3D Cytochrome P450 21 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 Pfam Cytochrome P450 28 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vvi18randomg18 499 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18randomg18 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18randomg18 K20619 - vvi:100263118 971.844