Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18randomg64 ATGGAGTGTGACATAGAGAGGGTTTTGTGGAGTCAAGACCAAATCTCCCGCCGTGTCTCCGACATCGCCTCTGAGATTTCTGCTGACTTCCATGCCCTCTCTTCTCCTCCGGTCTTCCTCGGCGTCGCCACTGGCGCTTTTCTCTTCTTGGCCGACCTCGTCCGCCACCTGTCCTTCCCCCTCACCGTCGATTTCGTCCGAGCCCAGTCTTACGGCTCTGGTACTGAGTCCAACGGCGCTCCCTCGATTTCCTTGGACTTGAAGATTGATATCAAGGGCAAGCACGTAATTGTGGTTGAGGACATTGTAGACACGGGAAACACTTTGTTCTGTCTCATTGCACACTTGGAAGCAAAGGGAGCATCCTCTGTATCAGTGTGTGCTTTCCTTGATAAACCATCAAGAAGAAAAGTTCAGTTTGAGCTAGTGGGTAAAGGGAAGTTTTATCGTGGTTTTGAGTGTCCAGATTATTTTGTTGTGGGGTATGGCATGGACTTCGCAGAACAGTACAGGAACTTGCCTTATGTGGGGGTCCTAAAGCCTGAAGTGTACAACTGA 558 50.18 MECDIERVLWSQDQISRRVSDIASEISADFHALSSPPVFLGVATGAFLFLADLVRHLSFPLTVDFVRAQSYGSGTESNGAPSISLDLKIDIKGKHVIVVEDIVDTGNTLFCLIAHLEAKGASSVSVCAFLDKPSRRKVQFELVGKGKFYRGFECPDYFVVGYGMDFAEQYRNLPYVGVLKPEVYN* 186
       

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18randomg64 185 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 8 180 IPR005904 GO:0004422|GO:0006166
Vvi18randomg64 185 SUPERFAMILY PRTase-like 4 184 IPR029057 -
Vvi18randomg64 185 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 2 184 - -
Vvi18randomg64 185 CDD PRTases_typeI 22 145 IPR000836 -
Vvi18randomg64 185 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 2 184 - -
Vvi18randomg64 185 Pfam Phosphoribosyl transferase domain 14 166 IPR000836 -
Vvi18randomg64 185 Gene3D - 1 185 IPR029057 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18randomg64 K00760 hprT, hpt, HPRT1; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] - vvi:100242653 372.859
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Vvi9g565 ECH 33 186 PRT Gene Family AT1G80050 77.3 4.6e-63 237.7
Vvi4g497 ECH 33 185 PRT Gene Family AT1G80050 75.2 2.8e-60 228.4
Vvi18g660 . 30 179 PRT Gene Family AT1G80050 72.7 2.0e-58 222.2
Vvi9g565 ECH 1 148 PRT Gene Family AT5G11160 82.4 3.6e-66 248.1
Vvi4g497 ECH 1 148 PRT Gene Family AT5G11160 81.1 1.8e-65 245.7
Vvi18g660 . 8 145 PRT Gene Family AT5G11160 71.7 3.5e-53 204.9
Vvi18g660 . 1 182 PRT Gene Family AT1G27450 80.8 6.2e-80 293.9
Vvi9g565 ECH 11 183 PRT Gene Family AT1G27450 74.6 9.0e-71 263.5
Vvi4g497 ECH 11 182 PRT Gene Family AT1G27450 70.9 2.6e-70 261.9
Vvi3g59 . 90 466 PRT Gene Family AT2G16570 65.6 1.2e-171 600.1
Vvi3g59 . 88 466 PRT Gene Family AT4G34740 67.1 1.7e-176 616.3
Vvi3g59 . 19 439 PRT Gene Family AT4G38880 53.6 6.5e-138 488.0
Vvi18g660 . 1 182 PRT Gene Family AT1G27450 80.8 6.2e-80 293.9
Vvi9g565 ECH 11 183 PRT Gene Family AT1G27450 74.6 9.0e-71 263.5
Vvi4g497 ECH 11 182 PRT Gene Family AT1G27450 70.9 2.6e-70 261.9
Vvi9g565 ECH 33 186 PRT Gene Family AT1G80050 77.3 4.6e-63 237.7
Vvi4g497 ECH 33 185 PRT Gene Family AT1G80050 75.2 2.8e-60 228.4
Vvi18g660 . 30 179 PRT Gene Family AT1G80050 72.7 2.0e-58 222.2
Vvi18g660 . 3 97 PRT Gene Family AT4G22570 77.9 3.1e-39 157.9
Vvi9g565 ECH 6 100 PRT Gene Family AT4G22570 75.8 2.2e-37 151.8
Vvi18g660 . 1 96 PRT Gene Family AT4G12440 78.1 6.9e-38 153.3
Vvi9g565 ECH 1 148 PRT Gene Family AT5G11160 82.4 3.6e-66 248.1
Vvi4g497 ECH 1 148 PRT Gene Family AT5G11160 81.1 1.8e-65 245.7
Vvi18g660 . 8 145 PRT Gene Family AT5G11160 71.7 3.5e-53 204.9
Vvi18randomg64 . 1 184 PRT Gene Family AT1G71750 63.1 8.5e-67 250.4
Vvi19g781 . 16 470 PRT Gene Family AT1G55810 84.9 1.8e-226 781.9
Vvi17g133 ECH 44 466 PRT Gene Family AT1G55810 78.0 7.1e-194 673.7
Vvi14g1277 . 28 448 PRT Gene Family AT1G55810 76.8 3.5e-193 671.4
Vvi14g1190 ECH 3 267 PRT Gene Family AT1G55810 83.8 5.9e-132 468.0
Vvi17g131 ECH 56 312 PRT Gene Family AT1G55810 76.7 1.9e-114 409.8
Vvi14g1191 ECH 8 216 PRT Gene Family AT1G55810 58.6 9.3e-61 231.5
Vvi14g1189 . 765 896 PRT Gene Family AT1G55810 80.3 4.0e-56 216.1
Vvi14g1277 . 48 447 PRT Gene Family AT3G27440 81.8 6.8e-191 663.7
Vvi19g781 . 67 474 PRT Gene Family AT3G27440 76.2 2.0e-182 635.6
Vvi17g133 ECH 64 466 PRT Gene Family AT3G27440 74.9 1.8e-175 612.5
Vvi14g1190 ECH 3 267 PRT Gene Family AT3G27440 78.5 5.5e-124 441.4
Vvi17g131 ECH 56 312 PRT Gene Family AT3G27440 71.3 2.6e-105 379.4
Vvi14g1189 . 765 896 PRT Gene Family AT3G27440 77.3 7.1e-55 211.8
Vvi14g1191 ECH 69 226 PRT Gene Family AT3G27440 65.2 8.9e-50 194.9
Vvi17g133 ECH 1 466 PRT Gene Family AT3G27190 83.3 3.4e-226 781.2
Vvi19g781 . 3 469 PRT Gene Family AT3G27190 75.4 6.8e-211 730.3
Vvi14g1277 . 16 448 PRT Gene Family AT3G27190 76.3 2.8e-196 681.8
Vvi14g1190 ECH 3 268 PRT Gene Family AT3G27190 91.4 8.5e-145 510.8
Vvi17g131 ECH 56 312 PRT Gene Family AT3G27190 84.1 1.0e-126 450.7
Vvi14g1191 ECH 1 217 PRT Gene Family AT3G27190 74.3 1.2e-82 304.3
Vvi14g1189 . 765 897 PRT Gene Family AT3G27190 91.7 3.2e-67 253.1
Vvi8g796 . 43 276 PRT Gene Family AT3G53900 75.6 2.0e-104 375.9
Vvi19g781 . 1 470 PRT Gene Family AT4G26510 86.1 1.7e-238 822.0
Vvi17g133 ECH 1 466 PRT Gene Family AT4G26510 74.7 1.6e-204 709.1
Vvi14g1277 . 27 448 PRT Gene Family AT4G26510 77.3 6.0e-196 680.6
Vvi14g1190 ECH 3 267 PRT Gene Family AT4G26510 84.5 2.0e-135 479.6
Vvi17g131 ECH 56 312 PRT Gene Family AT4G26510 79.1 4.9e-121 431.8
Vvi14g1191 ECH 1 217 PRT Gene Family AT4G26510 61.9 1.4e-67 254.2
Vvi14g1189 . 765 896 PRT Gene Family AT4G26510 84.1 2.0e-61 233.8
Vvi17g133 ECH 1 466 PRT Gene Family AT5G40870 84.3 1.2e-228 789.3
Vvi19g781 . 3 472 PRT Gene Family AT5G40870 75.3 3.6e-212 734.6
Vvi14g1277 . 27 448 PRT Gene Family AT5G40870 76.1 1.7e-193 672.5
Vvi14g1190 ECH 3 267 PRT Gene Family AT5G40870 92.5 1.3e-145 513.5
Vvi17g131 ECH 56 312 PRT Gene Family AT5G40870 84.9 3.6e-127 452.2
Vvi14g1191 ECH 1 217 PRT Gene Family AT5G40870 75.7 4.9e-84 308.9
Vvi14g1189 . 765 896 PRT Gene Family AT5G40870 92.4 1.4e-67 254.2