Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g1012 | ATGGACTACAAGCATAACATTCGTAATATGTCTGTTATTGCTCATGTTGATCATGGAAAGTCAACCCTCACAGATTCTTTAGTGGCTGCTGCTGGTATTATTGCTCAAGAAGTTGCTGGTGATGTTCGGATGACAGATACCCGCCAGGATGAAGCTGAGCGTGGTATCACAATTAAGTCTACTGGTATCTCTCTCTACTATGAGATGAGTGATGAGTCTCTCAAGAACTACAGGGGAGAGAGACAAGGGAACGAATACCTTATCAATCTTATTGATTCCCCTGGGCACGTGGACTTCTCATCTGAGGTTACTGCTGCTCTTCGTATTACTGATGGTGCACTTGTGGTTGTGGATTGTGTTGAGGGTGTTTGTGTCCAGACCGAAACTGTTCTGCGGCAGGCCCTGGGTGAAAGGATCCGTCCTGTCTTAACTGTCAATAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTGATGGAGAGGAGGCTTACCAGACATTCTCAAGGGTTATTGAGAATGCAAATGTTATCATGGCTACTTATGAAGATCCACTTCTTGGTGATGTTCAAGTTTACCCTGAAAAGGGAACAGTTGCGTTCTCTGCTGGTTTGCATGGTTGGGCTTTTACTCTAACCAACTTTGCCAAAATGTATGCTTCCAAATTTGGAGTTGATGAGTCTAAGATGATGGAAAGGCTTTGGGGTGAGAATTTCTTTGACCCTACGTGTGATGCAGACATGGCTCCCAGCAAGTACTGCCCTCCTAGAAATGATGATTTTCCACCTTCCCTCACCTTCCACAGCTCAAAAATACCGTGTAGAGAACTTGTATGA | 831 | 44.77 | MDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKNYRGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPTCDADMAPSKYCPPRNDDFPPSLTFHSSKIPCRELV* | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 19972383 | 19975720 | - | Vvi19g1012 | Vvi19g1012 | 782511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g1012 | 276 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 246 | IPR027417 | - | |
Vvi19g1012 | 276 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | PRINTS | GTP-binding elongation factor signature | 53 | 61 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | PRINTS | GTP-binding elongation factor signature | 89 | 99 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | PRINTS | GTP-binding elongation factor signature | 105 | 116 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | PRINTS | GTP-binding elongation factor signature | 141 | 150 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | PANTHER | BNAC03G76150D PROTEIN | 10 | 242 | - | - | |
Vvi19g1012 | 276 | Gene3D | - | 1 | 225 | IPR027417 | - | |
Vvi19g1012 | 276 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 46 | 61 | IPR031157 | - | |
Vvi19g1012 | 276 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 10 | 242 | - | - | |
Vvi19g1012 | 276 | CDD | EF2 | 8 | 218 | - | - | |
Vvi19g1012 | 276 | Pfam | Elongation factor Tu GTP binding domain | 5 | 209 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 241 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi19g1012 | 276 | TIGRFAM | small_GTP: small GTP-binding protein domain | 7 | 165 | IPR005225 | GO:0005525 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g1012 | K03234 | - | vvi:100261253 | 476.478 |