Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1045 ATGGATATTTTTATTTCTAAAGAAAGTAATCTTTACATGGATTGGACCACTCCCACCTCCATCACAGCAAGCAGAAAATCCAACACTGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTTTCGAAACTTGGAATGCAGCTTCTTCACAGGAGGGATCAAAACCCAATTGGAATTGTGAAGAATGCAATATATGATTATTTCGATGCCAATTACTCAAACAAATTTGATAAGTTTGACGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCTTGATCACGTCAGTAGGAGTTACAATGATACATACTACATCGACTCTCAAACTGTCTTGAGGTGCCACACTACTGCTAATCAAGCAGAGCTGTTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCGTAGAGATTCCATTGATTCAACTCACTACCCTGTTTTTCATCAGATGGAAGGCGTTAGTGTCTTCTTTCCAGGTGATTGGGAGACATTTGGACTGGATGGCACGTCTTATGCGGCTGAGGATTTAAAGAAATGTCTTGAGGGTTTGGCGCAGCACTTGTTTGGTAATGTGGAAATGCGCTGGATTGATACATATTTCCCTTTCACCAACCCATCATTTGAACTTGAGATGTATTTTCAGGAGAAATGGTTGGAAGTTTTAGGTTGTGGGGTGACAGAGCAAGAAATATTAAAGAAAAGTGGGAAAACAGGTAATGTTGCTTGGGCTTTTGGGCTTGGATTGGAATGGCTAGCAATGGTTCTGTTTGGGATACCTGATATTCGGCTTTTCTGGTCAACTGGAGCGGTTCACCTCTCAATTCTCAAAGGGCCAGCTTGGGGTCAAGTTCAAGCCATTTTCAAAGTATCCTCCTCGTTACAAGGACATGAGTTTTTGGATTAA 945 41.59 MDIFISKESNLYMDWTTPTSITASRKSNTDVVRDDPTNNVPDAIFSKLGMQLLHRRDQNPIGIVKNAIYDYFDANYSNKFDKFDDLCPIVSTKENFDDVLVPLDHVSRSYNDTYYIDSQTVLRCHTTANQAELLRRGHTHFLVTGDVYRRDSIDSTHYPVFHQMEGVSVFFPGDWETFGLDGTSYAAEDLKKCLEGLAQHLFGNVEMRWIDTYFPFTNPSFELEMYFQEKWLEVLGCGVTEQEILKKSGKTGNVAWAFGLGLEWLAMVLFGIPDIRLFWSTGAVHLSILKGPAWGQVQAIFKVSSSLQGHEFLD* 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 20987713 21002630 + Vvi19g1045 Vvi19g1045 782544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1045 314 Pfam tRNA synthetases class II core domain (F) 78 281 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Vvi19g1045 314 PANTHER PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL 30 287 IPR004530 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Vvi19g1045 314 SUPERFAMILY Class II aaRS and biotin synthetases 49 282 IPR045864 -
Vvi19g1045 314 CDD PheRS_alpha_core 59 281 - -
Vvi19g1045 314 Gene3D Bira Bifunctional Protein; Domain 2 176 289 IPR045864 -
Vvi19g1045 314 Gene3D Bira Bifunctional Protein; Domain 2 22 175 IPR045864 -
Vvi19g1045 314 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 145 292 IPR006195 -
Vvi19g1045 314 PANTHER PHENYLALANYL-TRNA SYNTHETASE 30 287 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1045 K01889 - vvi:100265994 487.648