Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1052 ATGCTTACTTACTTCAGAGGGGCCACTGCTCGCCACCACCACTTCATGGCTGTGCCCATTTCACTTGCCCAAGCCACTCTCTTCTCCAAACCCTCCATTTTACTCCACAGAAATGCCATCAATGGCTTCTCCTTTTTCATTCCTTTCTCCTCTTCTTCTGCTCAGAAGATTCAGACTCACAAGTGGAGGCAACCGGTGGTCTCGGTTCTGGATCTTGGTGGAGTCAAGATTGGCAGAGATGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTTTTGAAACTTGGAATGCAGCTTCACAGGAGGGATCAACACCCAGTTGGAATTCTGAAGAATGCAATATATGATTATTTCAATGCCAATTACTCTAACAAATTTGATAAGTTGGATGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCCTGATCACGTCAGTAGAAGTTACAATGATACATACTACATTGACTCCCAAACTGTCTTGAGGTGCCACACTAGTGCTCATCTAGCAGAGCTATTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCCTAGAGATTCCATTGATTCAACTCACTACCCTGTTTTTCATCAGATGGAAGGTGTTCGTGTCTTCTTTCCAGGTGATTGGGAGACATCTGGAATGGATGGCACGTCTTATGCGGCTGAGGATTTAAAGAAATGTCTTGAGGGTTTGGTGCAGCACTTGTTTGGTAATGTGGAAATGCGCTGGATTGATACATATTTCCCTTTCACCAACCCATCATTTGAACTTGAGATATATTTTCAGGTATGCTTTTGA 846 43.5 MLTYFRGATARHHHFMAVPISLAQATLFSKPSILLHRNAINGFSFFIPFSSSSAQKIQTHKWRQPVVSVLDLGGVKIGRDDVVRDDPTNNVPDAIFLKLGMQLHRRDQHPVGILKNAIYDYFNANYSNKFDKLDDLCPIVSTKENFDDVLVPPDHVSRSYNDTYYIDSQTVLRCHTSAHLAELLRRGHTHFLVTGDVYPRDSIDSTHYPVFHQMEGVRVFFPGDWETSGMDGTSYAAEDLKKCLEGLVQHLFGNVEMRWIDTYFPFTNPSFELEIYFQVCF* 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21167539 21173705 + Vvi19g1052 Vvi19g1052 782551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1052 281 PANTHER PHENYLALANYL-TRNA SYNTHETASE 36 278 - -
Vvi19g1052 281 SUPERFAMILY Class II aaRS and biotin synthetases 98 280 IPR045864 -
Vvi19g1052 281 Gene3D Bira Bifunctional Protein; Domain 2 74 225 IPR045864 -
Vvi19g1052 281 Gene3D Bira Bifunctional Protein; Domain 2 226 279 IPR045864 -
Vvi19g1052 281 PANTHER PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL 36 278 IPR004530 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Vvi19g1052 281 Pfam tRNA synthetases class II core domain (F) 106 277 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1052 K01889 - vvi:100256002 569.311