Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g1054 | ATGCTAAATTTAGCTGAACAATGGGGATGGACTGGCAATGACACTGAAACTCATCTGGGAAAACTTCTGAAGCAAATGATCGATGAGAGTGACCCTAAATTACCATTTGGATACATCAAATTGGATGAGGTAGCAAGCCGTGCAAAAATAAACTCTCCTCCCCTCATGACCATGATGAGCGCCCTGAACAAGGAGGGATATGCTGTTAGCAGGTCACACATTGCCTCCAACGCAATTAAGACAAACTGCCCAATGGCAGTCTCCATTAGGATTGCAAAGGAACTTCAGCAATGTTGA | 297 | 44.11 | MLNLAEQWGWTGNDTETHLGKLLKQMIDESDPKLPFGYIKLDEVASRAKINSPPLMTMMSALNKEGYAVSRSHIASNAIKTNCPMAVSIRIAKELQQC* | 99 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 21197351 | 21198117 | - | Vvi19g1054 | Vvi19g1054 | 782553 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g1054 | 98 | PANTHER | N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE | 1 | 98 | IPR002905 | GO:0003723|GO:0004809|GO:0008033 | |
| Vvi19g1054 | 98 | PANTHER | TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE | 1 | 98 | - | - | |
| Vvi19g1054 | 98 | Pfam | N2,N2-dimethylguanosine tRNA methyltransferase | 14 | 90 | IPR002905 | GO:0003723|GO:0004809|GO:0008033 | |
| Vvi19g1054 | 98 | Gene3D | - | 35 | 95 | IPR042296 | - | |
| Vvi19g1054 | 98 | ProSiteProfiles | Trm1 methyltransferase domain profile. | 1 | 92 | IPR002905 | GO:0003723|GO:0004809|GO:0008033 | |
| Vvi19g1054 | 98 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 5 | 93 | IPR029063 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi19g1054 | K00555 | - | vvi:100853000 | 200.675 |