Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1061 ATGTGGCCTAATAAAGCAATATTACTGGTTATATTTTGGACACATCTCAATGCCATCAATGGCTTCTCCTTTTTCATTCCTTTCTCCTCTTCTTCTGCTCAGAAGATTCAGACTCATAAGTGGAGGCAACCGGTAGTCTCGGTTCTGGAGCTTGGTGGAGTCAAGATTGGCAGAGATGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTGTCGAAACTTGGAATGCAGCTTCACAGGAGGGATCAACACCCAATTGGAATTCTGAAGAATGCAATATATGATTATTTCGATGCCAATTACTCTAACAAATTTGATAAGTTGGATGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCCTGATCACATCAGTAGGAGTTACAATGATACATACTACATTGACTCTCAAACTGTCTTGAGGTGCCACACTAGTGCTCATCAAGCAGAGCTGTTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCGTAGAGATTCCATTGATTCAACTCACTACCGTGTTTTTCATTAG 576 41.49 MWPNKAILLVIFWTHLNAINGFSFFIPFSSSSAQKIQTHKWRQPVVSVLELGGVKIGRDDVVRDDPTNNVPDAILSKLGMQLHRRDQHPIGILKNAIYDYFDANYSNKFDKLDDLCPIVSTKENFDDVLVPPDHISRSYNDTYYIDSQTVLRCHTSAHQAELLRRGHTHFLVTGDVYRRDSIDSTHYRVFH* 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21410607 21416816 + Vvi19g1061 Vvi19g1061 782560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1061 191 SUPERFAMILY Class II aaRS and biotin synthetases 77 191 IPR045864 -
Vvi19g1061 191 PANTHER PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL 21 191 IPR004530 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Vvi19g1061 191 Gene3D Bira Bifunctional Protein; Domain 2 53 191 IPR045864 -
Vvi19g1061 191 Pfam tRNA synthetases class II core domain (F) 84 191 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Vvi19g1061 191 PANTHER PHENYLALANYL-TRNA SYNTHETASE 21 191 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1061 K01889 - vvi:104877750 388.652