Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g1067 | ATGTTTATCGTAGAGATTCCATTGATTCAACTCACTACCCTGTTTTTCATTAGATGGAAGGTGTTCGTGTCTTCTTTCCAGGTGATTGGGAGCATGACATCTGGAATGGATGACATGTCTTATGCGGCTGAGGATTTAAAGAAATGTCTTGAGGGTTTGGTGCAGCACTTGTTTGGTAATCTGGAAATGCGCTGGATTGATACATATTTCCCTTTCACCAACCCATAA | 228 | 41.23 | MFIVEIPLIQLTTLFFIRWKVFVSSFQVIGSMTSGMDDMSYAAEDLKKCLEGLVQHLFGNLEMRWIDTYFPFTNP* | 76 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 21573406 | 21590123 | + | Vvi19g1067 | Vvi19g1067 | 782566 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g1067 | 75 | Pfam | tRNA synthetases class II core domain (F) | 40 | 75 | IPR002319 | GO:0000049|GO:0004812|GO:0005524|GO:0043039 | |
| Vvi19g1067 | 75 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 31 | 75 | - | - | |
| Vvi19g1067 | 75 | Gene3D | Bira Bifunctional Protein; Domain 2 | 14 | 75 | IPR045864 | - | |
| Vvi19g1067 | 75 | PANTHER | PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL | 31 | 75 | IPR004530 | GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi19g1067 | K01889 | - | vvi:100256002 | 89.7373 |