Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1069 ATGGTTCTGTTTGGGATACCTGATATTTGGCTTTTCTGGTCAACTGATGAGCGGTTCACCTCTCAATTCTCAAAGGGCCAGCTTGGGGTCAAGTTCAAGCCATTTTCAAAGTATCCTCCTTGTTACAAGGACAAGAGTTTTTGGATTAATGAGTTGTTCACAGAAAACAATTTATGTGATGTTGTAAGAGGAGTTGCTGGAGATCTTGTCGAGGGGGTGCAATTGATCGACAATTTCACCAACAAGAAAGGAATGACCAGTCAATGTTATCGGATAGCATACCGGTCCATGGAGCGTTCACTTACAGATGAGGAGATAAACGAGTTGCAGTGGAATGTTAGGGAGCAAGTGCAGAGCAAGTTGAAGGTTGTTCTTAGATGA 381 42.78 MVLFGIPDIWLFWSTDERFTSQFSKGQLGVKFKPFSKYPPCYKDKSFWINELFTENNLCDVVRGVAGDLVEGVQLIDNFTNKKGMTSQCYRIAYRSMERSLTDEEINELQWNVREQVQSKLKVVLR* 127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21600091 21602861 + Vvi19g1069 Vvi19g1069 782568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1069 126 SMART FDX_ACB_2 36 126 IPR005121 -
Vvi19g1069 126 Gene3D - 33 125 IPR036690 -
Vvi19g1069 126 Pfam Ferredoxin-fold anticodon binding domain 36 126 IPR005121 -
Vvi19g1069 126 SUPERFAMILY Anticodon-binding domain of PheRS 31 126 IPR036690 -
Vvi19g1069 126 ProSiteProfiles Ferredoxin-fold anticodon binding (FDX-ACB) domain profile. 36 126 IPR005121 -
Vvi19g1069 126 Gene3D Bira Bifunctional Protein; Domain 2 1 32 IPR045864 -
Vvi19g1069 126 PANTHER PHENYLALANYL-TRNA SYNTHETASE 1 121 - -
Vvi19g1069 126 PANTHER PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL 1 121 IPR004530 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1069 K01889 - vvi:100265994 249.21