Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1079 ATGTTCAAGAATCAGTCATATGAGTCTCAACGTCTATACTCAGTTTTAGAATGGAGTTATGATAAGTTGCCTAGTGATACCATCAAATCATGTTTCATCTATTGCTCTTTATTCCCCGAGGATCATGAAATTTGTTGTGATCAGCTGATAGAACTTTGGATTGGGGAGGGATTCTTGGATGAATTTGATCATATACATGAAGCAAGAAACCAAGGAGGTATCATCATTGAGCATTTACAGCATGCAAATCTATTGCAGAATGGTATATCTGAGAAATATGTGACAATGCACGACCTAATTCGTGATTTCTCCTTGTGGATAGCTGGTGAGAGCGGGAGGAAGAAGAAATTTGTGGTACAAGAAGAGGTTGAATCCATTGAAGCTGACAAAGTGGCAACATGGAAGGAGGCACAGAGGATATCATTGTGGGACTGTAATGTGGAAGAGCTGAAAGAGTCACCATCTTTCCTCAATCTTGAGACATTGATGGTATCGTGTAAGTTCATATCATGCCCAAGTGGACTCTTTGGGTATATGCCTCTCATAAGAGTTTTGGACTTGTCCAAAAATTTTGGATTGATTGAGTTACCAGTGGAGATTGATAGGTTAGCAAGCTTGCAGTATCTTAATTTGTCCTACACACAGATAGTAAAGCTGCCAATCCAGCTCGAGAAACTGTCAAAACTAAGGTGTTTGATATTGGATGAGATGCATCTGCTTCGAATAATTCCTCGTCAACTGATATCAAAGCTTTCATCGTTGCAGCTGTTTAGTATTTTCAATTCCATGGTTGCCCATGGAGATTGTAAAGCCCTATTGAAGGAGTTAGAGTGTTTGGAGCATTTGAATGAGATCTCCATCCGTCTAAAACGTGCTCTCCCCACCCAAACATTATTCAATTCCCACAAGTTGAGAAGGAGCATAAGACGGCTAAGCCTGCAAGACTGTGCCGGCATGAGCTTTGTCCAACTGTCCCCTCATCTACAGATGCTTGAAATCTATGCATGTTCTGAACTGAGGTTTGTGAAAATCTCTGCAGAAAAGGAAGGCCCATCTGATATGGTCCATCCAAATTTCCCAAGCCACCAATATTTCTGCAAGCTTCGTGAAGTAGAGATAGTTTTTTGTCCAAGATTGTTGAACTTGACATGGCTTGCTCACGCTCAAAACCTTCTGTCCCTGGTTGTTAGAAACTGTGAGTCTCTGGAAGAAGTGATAGGAGAAGGTGGTGGAGTGGCAGAAATTGAACAAGATTTGGTGGTCGTATTCTCAGGACTCAAAACTCTCCATTTGTGGAGTCTACCAAAGCTAAAGAGTATATATGGAAGACCCCTGCCATTTCCTTCCTTGAGGGAGTTTAATGTGAGATTCTGTCCAAGTCTTAGGAAGCTGCCTTTTGATTCTGATACCTGGGCTAGTAAAAATCCATTGAAAATCAAGGGAGAAGAAGAATGGTGGGATGGACTCGAGTGGGAGGATCAAAACAGTGCTAAGCTCTCTCTCTCTCCATGTTTCGTGCCTGTGAGGTGGTGA 1533 41.88 MFKNQSYESQRLYSVLEWSYDKLPSDTIKSCFIYCSLFPEDHEICCDQLIELWIGEGFLDEFDHIHEARNQGGIIIEHLQHANLLQNGISEKYVTMHDLIRDFSLWIAGESGRKKKFVVQEEVESIEADKVATWKEAQRISLWDCNVEELKESPSFLNLETLMVSCKFISCPSGLFGYMPLIRVLDLSKNFGLIELPVEIDRLASLQYLNLSYTQIVKLPIQLEKLSKLRCLILDEMHLLRIIPRQLISKLSSLQLFSIFNSMVAHGDCKALLKELECLEHLNEISIRLKRALPTQTLFNSHKLRRSIRRLSLQDCAGMSFVQLSPHLQMLEIYACSELRFVKISAEKEGPSDMVHPNFPSHQYFCKLREVEIVFCPRLLNLTWLAHAQNLLSLVVRNCESLEEVIGEGGGVAEIEQDLVVVFSGLKTLHLWSLPKLKSIYGRPLPFPSLREFNVRFCPSLRKLPFDSDTWASKNPLKIKGEEEWWDGLEWEDQNSAKLSLSPCFVPVRW* 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21811436 21812969 - Vvi19g1079 Vvi19g1079 782578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1079 510 SUPERFAMILY L domain-like 92 471 - -
Vvi19g1079 510 Gene3D Ribonuclease Inhibitor 114 352 IPR032675 -
Vvi19g1079 510 PANTHER OS12G0491200 PROTEIN 8 497 - -
Vvi19g1079 510 Gene3D - 15 105 IPR036388 -
Vvi19g1079 510 Gene3D Ribonuclease Inhibitor 359 475 IPR032675 -
Vvi19g1079 510 PANTHER DISEASE RESISTANCE PROTEIN RP 8 497 IPR044974 GO:0006952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1079 - K13459 vvi:100242696 1015.37