Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1081 ATGGTACTTGCATGCCTGTTGACGTCTGATGAATCTCACGGACGTGTGAAAATGCATGATGTCATTCGTGATATGGCTTTGTGGATAGCTTGTGAAAATGGGAAGAAGAAGAACAAATTTGTGGTAAAAGAGCAAGTTGAATTGATTAAAGGCCATGAAATTACAAAATGGAAGAACGCACAAAGGATATCAGTTTGGAATAGTGGTATCGAAGAACGCATGGCACCACCACCTTTTCCTAATCTTGAGACTCTGTTGTCAGTGGGTGGATTGATGAAGCCATTTCTAAGTGGGTTCTTTAGATATATGCCTGTCATAAGAGTGTTGGCCTTGGTAGAAAACTATGAACTGACGGAGTTACCTGTGGAGATTGGTGAATTGGTTACATTGCAGTATCTTAATTTATCACTCACGGGAATAAAAGAGTTACCAATGGAGCTTAAGAAATTGACAAAACTGAGGTGCTTGGTATTGGATGACATGCTTGGACTTAAAACAATTCCACATCAAATGATATCAAGTCTTTCATCTTTGGAATCGTTCAGTTTTTACAATTCTGGAGCCACCATTGGAGATTGCAGTGCCTTATTAGAGGAGTTAGAGAGCTTGGAACACCTGAACGAGATATTCATCACACTTAGAAGTGTCACTCCTGTAAAAAGATTACTGAACTCTCACAAGTTACGAAGGGGCATAAATCGGCTACATGTAGAATCCTGCAACCACCTGAGCTCACTCAATGTGTACCCTTATCTGCAGAAACTTGAAATAAACATATGTGATGACTTGGAAGATGTGAAATTCATTGTGGAAAAGGAAAGGGGTGGGGGATTTGCAGCATATAATGTGGTCCAATCAAACATGGCAAAGCACCAAAACTTCTGCTATCTTCGTCATGTAGCGATATGTCATTGTCCAAAATTATTGAACTTAACATGGTTTATTTATGCTACACGCCTTCAATTCCTTAATGTTAGTTTCTGTGATTCAATGGAAGAAGTGGTAGAAGATAAAAAGAATGGAGTTTCAGAAATTCAGCAAGAGTTAGGCCTATTCTCAAGACTCGTATCTCTCCATTTGTCTTGTCTACCAAATCTAAGGAGAATATATAGAAGGCCTCTACAATTTCCTTCCCTAAAAGAGATGACTGTTAAATACTGTCCAAATCTGGGGAAGCTGCCATTTGATTCCAAAGCTGGGATTAGTAACAGTTTACAGAAGATCCATGGAGCCCAGGAATGGTGGGATGGGCTAGAGTGGGAGGACCAAACCATTATGCAAAACCTCATCCCATACTTCGTTCCGATTCTGGTCTTCGCGATCACGATTGAGGTGTGA 1338 40.13 MVLACLLTSDESHGRVKMHDVIRDMALWIACENGKKKNKFVVKEQVELIKGHEITKWKNAQRISVWNSGIEERMAPPPFPNLETLLSVGGLMKPFLSGFFRYMPVIRVLALVENYELTELPVEIGELVTLQYLNLSLTGIKELPMELKKLTKLRCLVLDDMLGLKTIPHQMISSLSSLESFSFYNSGATIGDCSALLEELESLEHLNEIFITLRSVTPVKRLLNSHKLRRGINRLHVESCNHLSSLNVYPYLQKLEINICDDLEDVKFIVEKERGGGFAAYNVVQSNMAKHQNFCYLRHVAICHCPKLLNLTWFIYATRLQFLNVSFCDSMEEVVEDKKNGVSEIQQELGLFSRLVSLHLSCLPNLRRIYRRPLQFPSLKEMTVKYCPNLGKLPFDSKAGISNSLQKIHGAQEWWDGLEWEDQTIMQNLIPYFVPILVFAITIEV* 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21850793 21853319 + Vvi19g1081 Vvi19g1081 782580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1081 445 SUPERFAMILY L domain-like 6 409 - -
Vvi19g1081 445 Gene3D Ribonuclease Inhibitor 32 272 IPR032675 -
Vvi19g1081 445 PANTHER OS12G0491200 PROTEIN 3 212 - -
Vvi19g1081 445 PANTHER OS12G0491200 PROTEIN 220 426 - -
Vvi19g1081 445 Coils Coil 328 348 - -
Vvi19g1081 445 PANTHER DISEASE RESISTANCE PROTEIN RP 3 212 IPR044974 GO:0006952
Vvi19g1081 445 PANTHER DISEASE RESISTANCE PROTEIN RP 220 426 IPR044974 GO:0006952
Vvi19g1081 445 Gene3D Ribonuclease Inhibitor 293 408 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1081 - K13459 vvi:100263392 884.789