Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1084 ATGTCGCAGAACAGCAATTACAACTCCGGAAGTGGGCCGGACTTCAATATAACGGATGACATATTAGCTGTGATTCCGACTGACCCGTACGATCAGCTGGATCTGGCTCGGAAGATCACATCCATGGCGATCGCATCGCGCGTATCGAAGCTGGAGTCGGAGGTTGGTAGGCTGCGGCAGATGATGTATGAGAAGGATCGGGTGGCGTTTGATCTTGAAGAGAAGGTGTCGCAACTTGAGAGGGCGTATCAGGAGAGCGAGTCGCGGTTGAAGATGGTTATCGACGAAAATACAAGGCTTTCAAAGGAGCGAGACTCATTGGCGATGACTGCAAAGAAAATGGGCCGTGATCTGGCTAAGTTGGAGACATTCAAGAGGCAACTGATGCAGTCACTAAGTGATGATAATTCATCTCAAACTGAGACTGTTGATATTGGGACCTGTGACCAATCAATTCCTAAGGCCTATCCTGATATAGATGATGGAACAAATGGCTATGTGGTGAATCAACCTCTTAGTGGCTTTACAGAATATAGAAACTCTACTGATGAAGCTTCGAGGCTTGCAGTGCAAAGATTTTCTGTGACCCCATATATCACACCTCGCTTCACTCCAAGTGGAACCCCAAAAATCTTTTCCACAGGTGGGTCCCCAAGAGGTTATTCTGCTGTAGCATCTCCAAATAAAACTTCTGGTGCCACATCTCCCACAAAATCCCAATATGATGGACGGGGTGCACTATCGTCTTGGTATCCCTCGAGTCAGCAGTCATCTGCAGCTAACTCTCCCCCTCGTGCACGTCCCCTACCAGCACGAACTCCTCGAATTGATGGCAAGGAGTTCTTCCGTCAAGCCAGGAGCCGTCTGTCCTATGAACAGTTCAGTGCGTTTCTAGCTAACATTAAGGAATTAAATGCTCAAAAGCAATCACGAGAGGAAACTTTAAGGAAAGCAGAAGAGATATTTGGGACAGATAACAAGGATCTTTACCTATCATTTCAAGGATTGCTTAACCGCAACCCACACTAG 1029 47.04 MSQNSNYNSGSGPDFNITDDILAVIPTDPYDQLDLARKITSMAIASRVSKLESEVGRLRQMMYEKDRVAFDLEEKVSQLERAYQESESRLKMVIDENTRLSKERDSLAMTAKKMGRDLAKLETFKRQLMQSLSDDNSSQTETVDIGTCDQSIPKAYPDIDDGTNGYVVNQPLSGFTEYRNSTDEASRLAVQRFSVTPYITPRFTPSGTPKIFSTGGSPRGYSAVASPNKTSGATSPTKSQYDGRGALSSWYPSSQQSSAANSPPRARPLPARTPRIDGKEFFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGTDNKDLYLSFQGLLNRNPH* 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21901989 21911420 - Vvi19g1084 Vvi19g1084 782583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1084 342 MobiDBLite consensus disorder prediction 199 278 - -
Vvi19g1084 342 PANTHER OSJNBA0008M17.14 PROTEIN 11 340 - -
Vvi19g1084 342 MobiDBLite consensus disorder prediction 199 263 - -
Vvi19g1084 342 Coils Coil 301 321 - -
Vvi19g1084 342 Coils Coil 69 103 - -
Vvi19g1084 342 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016021|GO:0022857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1084 - - vvi:100261617 643.269