Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1087 ATGGCTGGTCTGTTGCCTGGCGATCCGTCACATCATGGAATGTATGAAGGTGGGTCTTACAAATTTCCTCAGGACAAACCAGAGGAAGGTGGCCGTTGGTACTTATCTAGGAAGGAAATTGAAGAAAATTCCCCTTCCAAGCGTGATGGAATTGATTTGAAAAAAGAGACTTACCTACGCAAGTCGTACTGTACATTTCTACAGGATTTGGGCATGAGGCTCAAAGTGCCCCAGGTAACAATTGCTACAGCAATCATATTTTGTCACCGTTTCTTCCTTCGTCAATCCCATGCAAAGAATGACAGAAGGACAATTGCAACAGTGTGTATGTTTCTTGCGGGGAAGGTTGAAGAAACTCCCCGTCCATTAAAAGATGTTATCCTTGTTTCTTATGAAATCATTAATAAAAAGGATCCTGCTGCAGTTCAAAGGATAAAGCAGAAGGAGGTATATGAACAGCAGAAGGAATTAATTTTACTTGGAGAGAGGGTTGTACTTGCTACACTTGGTTTTGATCTTAATGTGCACCATCCATATAAACCCCTTGTAGAGGCAATAAAGAAATTCAAGGTTGCTCAAAATGCCCTTGCTCAAGTTGCTTGGAATTTTGTCAATGATGGACTGCGGACATCTCTTTGCTTGCAATTTAAGCCCCACCACATTGCGGCAGGTGCAATTTTCCTTGCTGCCAAGTTCCTCAAAGTAAAGCTCCCATCAGATGGTGAGAAGGTCTGGTGGCAGGAGTTCGATGTCACCCCACGCCAATTAGAGGAGGTCAGTAATCAAATGTTGGAGCTCTACGAACAAAATCGAGTGCCACCTTCTCAAGGCAGTGAAGTTGAAGGAAGTGTTGGAGGTGGGGCTGCTCATCGGGCCACATCAAAAGCTCCAGCTGCTAATGAAGAATATCCATATGTTGATAATATTAGTGGACCTTCAAGAACCAGCCAAAATCGAAGTAATGACTATGGAAGCACGGAGATGAGAAGTGCTTCAGACCACAAGGCTGATGGAGAATCAAGTGATTATCATGAACATGAACCATCACTTTACCAGGAGAACTTGGGGGAAGGTCAAAATGCGTCAAGGCATGGGTCAGAGGGGCCTGGTGAAGATGATCAAGAAAGGACTGCTATTAAAAAGATTGATAAAGACAAGGTAAAGGCTGCACTGGAGAAAAGAAGGAAAACTCGTGGTGACATGACTAGAAAAACAGACCTGATGGATGAGGATGATCTTATCGAGAGAGAACTGGAAGATGGTATCGAGCCAGAACATGAGAGCTCACACCATGGGAAGCATCAAGATGATGAAGATGGACACCACCAAGGACTGAAACCCCTGTCATCACGAGGATCAGATTTGGAGAATGTGGAGGAAGGTGAGGTATCTGCATTTGATGACGCTGACCGAGCATTTCGATCACCCAAGTCAAGCAGTCGAAAGAGGAAACCGGGAAGCTCACCAGAAAAACTCTCAGATGGAAAGCAGCGGCATGATTATATGCCTGGCTCCCACCACCATAACCATCATGATTTCCCAGAAGATCGGAACAGACTCGGCCGGCTTGGTTACTCAGAGAGGGATCACAAAAGGCATGCACAGGAAAATCATGTCTGA 1620 44.88 MAGLLPGDPSHHGMYEGGSYKFPQDKPEEGGRWYLSRKEIEENSPSKRDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGSVGGGAAHRATSKAPAANEEYPYVDNISGPSRTSQNRSNDYGSTEMRSASDHKADGESSDYHEHEPSLYQENLGEGQNASRHGSEGPGEDDQERTAIKKIDKDKVKAALEKRRKTRGDMTRKTDLMDEDDLIERELEDGIEPEHESSHHGKHQDDEDGHHQGLKPLSSRGSDLENVEEGEVSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYMPGSHHHNHHDFPEDRNRLGRLGYSERDHKRHAQENHV* 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 21934771 21952939 - Vvi19g1087 Vvi19g1087 782586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1087 539 MobiDBLite consensus disorder prediction 1 30 - -
Vvi19g1087 539 Gene3D - 24 173 - -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 453 476 - -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 271 539 - -
Vvi19g1087 539 CDD CYCLIN 174 235 IPR013763 -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 328 351 - -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 483 539 - -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 309 327 - -
Vvi19g1087 539 CDD CYCLIN 59 130 IPR013763 -
Vvi19g1087 539 Gene3D - 175 279 - -
Vvi19g1087 539 SUPERFAMILY Cyclin-like 31 175 IPR036915 -
Vvi19g1087 539 PIRSF Cyclin_L 31 538 - -
Vvi19g1087 539 Pfam Cyclin, N-terminal domain 34 174 IPR006671 -
Vvi19g1087 539 SMART cyclin_7 65 167 IPR013763 -
Vvi19g1087 539 SMART cyclin_7 180 265 IPR013763 -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 366 411 - -
Vvi19g1087 539 MobiDBLite consensus disorder prediction 419 445 - -
Vvi19g1087 539 PANTHER CYCLIN 306 377 IPR043198 GO:0006357|GO:0016538
Vvi19g1087 539 PANTHER CYCLIN 378 448 IPR043198 GO:0006357|GO:0016538
Vvi19g1087 539 PANTHER CYCLIN 1 303 IPR043198 GO:0006357|GO:0016538
Vvi19g1087 539 SUPERFAMILY Cyclin-like 176 272 IPR036915 -
Vvi19g1087 539 PANTHER - 378 448 - -
Vvi19g1087 539 PANTHER - 1 303 - -
Vvi19g1087 539 PANTHER - 306 377 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1087 K15188 - vvi:100265067 1014.99