Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1091 ATGAATTGCAGTGGGAGGACCAAACCATTATGCACAACCTCACTCCATATTTTCAATCCACACAATTCAAGACGAAATTTGAATTGTTTGGGACTCAGGAGTCATGGAGCTATTAGATTATGCACAACCGCCAAGAAACTATCCCTTAATCTCTGCGAAATTCAAAAACCAAAATGCAAAAGCTCAAAGAAAGACATGACAAGCTTCTCCAATCCCCACAAGCCTCGATTAGCTCTGGTTATCTTAGTCGGCTGCTTCTGTTTCACTTTTATTAGTATCTTGTCAGCCTGTACCACAAAACTTGAAGATGATGATAAATATGGATTCAACGCTTTTGTAATGAAAAGAAAGTGTTGCGGCTTACCACTTGCCCTCATCACCATAGGGCGAGCAATGGCGGGAACAAAAACACCCGAAGAATGGGAGAAAAAAATACAAATGTTGAAGAATTATCCGGCAAAGTTTCCAGGTATGGAGAATCGTCTGTTTTCACGCTTGGCATTCAGTTATGATAGCCTACCCGATGAAACCATCAAATCGTGTTTCCTATATTGCTCTTTATTTCCGGAGGATTATGAAATCTCTCATCGAAATATTATACAACTTTGGATTGGGGAGGGTTTTCTGGATGAATGTGACAACATACAAAAAGCAAGAAATCAAGGCGAAGAAGTTATTAAAAGTTTACAGCTTGCATGTCTATTGGAGAATGGCATATCTCCATTAGATGAAAAAGACGAATATTTGAAGATGCATGATGTTATTCGTGATATGGCTTTGTGGTTGGCTCACGAAAATGGGAAGAAGAAGAACAAATTTGTGGTAAAAGATGGAGTCGAATCGATTAGAGCTCAGGAAGTTGAAAAATGGAAAGAGACACAGAGGATATCATTGTGGAATACCGACATTGAAGAACATAGGAAACCACCATATTTCCCTAATATTGAGACCTTTTTGGCATCAAGTGTGTTTATTGAGTCATTTTCAAATAGATTCTTTACAAACATGCCTATTATAAGAGTTTTGGACTTGTCAAACAATTTTAAACTTATGAAGTTACCTGTGGAGATTAGAAACTTAGTTACCTTGCAATATCTTAATTTGTCGTGTACAAGTATTGAATACTTACCTGTGGAGCTCAAGAACTTGAAAAAATTAAGGTGCTTGATATTGAATGATATGTATTTTCTTGAGTCACTTCCATCTCAAATGGTATCGAGTCTTTCCTCTTTGCAATTGTTTAGTATGTATAGCACGGAAGGGTCAGCCTTTAAGGGATATGATGAAAGAAGGTTATTAGAAGAGTTAGAGCAGTTGGAACACATTGATGATATATCCATCGACCTTACAAGTGTATCATCCATCCAAACATTATTTAACTCCCACAAGTTGCAAAGATCCACAAGATGGCTACAATTAGTTTGTGAGCGTATGAACCTGGTCCAACTATCCCTTTATATAGAGACCCTCCATATTAAAAATTGTTTTGAATTGCAAGATGTGAAAATCAATTTTGAAAATGAAGTGGTGGTCTACTCAAAATTCCCAAGGCACCCATGCTTGAACAACCTTTGTGATATGATGAAAGAAGTGAAGTTTTAG 1602 37.14 MNCSGRTKPLCTTSLHIFNPHNSRRNLNCLGLRSHGAIRLCTTAKKLSLNLCEIQKPKCKSSKKDMTSFSNPHKPRLALVILVGCFCFTFISILSACTTKLEDDDKYGFNAFVMKRKCCGLPLALITIGRAMAGTKTPEEWEKKIQMLKNYPAKFPGMENRLFSRLAFSYDSLPDETIKSCFLYCSLFPEDYEISHRNIIQLWIGEGFLDECDNIQKARNQGEEVIKSLQLACLLENGISPLDEKDEYLKMHDVIRDMALWLAHENGKKKNKFVVKDGVESIRAQEVEKWKETQRISLWNTDIEEHRKPPYFPNIETFLASSVFIESFSNRFFTNMPIIRVLDLSNNFKLMKLPVEIRNLVTLQYLNLSCTSIEYLPVELKNLKKLRCLILNDMYFLESLPSQMVSSLSSLQLFSMYSTEGSAFKGYDERRLLEELEQLEHIDDISIDLTSVSSIQTLFNSHKLQRSTRWLQLVCERMNLVQLSLYIETLHIKNCFELQDVKINFENEVVVYSKFPRHPCLNNLCDMMKEVKF* 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22021510 22044521 - Vvi19g1091 Vvi19g1091 782590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1091 533 Gene3D - 170 260 IPR036388 -
Vvi19g1091 533 PANTHER DISEASE RESISTANCE PROTEIN RP 114 501 IPR044974 GO:0006952
Vvi19g1091 533 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 114 501 - -
Vvi19g1091 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 185 IPR027417 -
Vvi19g1091 533 Gene3D - 93 169 IPR042197 -
Vvi19g1091 533 Gene3D Ribonuclease Inhibitor 277 532 IPR032675 -
Vvi19g1091 533 SUPERFAMILY L domain-like 250 505 - -
Vvi19g1091 533 Pfam NB-ARC domain 111 171 IPR002182 GO:0043531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1091 - K13459 vvi:100263309 799.275