Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1092 ATGTCGACGATAAAAATTGCTCCCGACCTAGGGGTGGAACGCATCCAGGGAGAAGGGGGTATATACAGTGCAACAAAGGAATTTTTACAATTTTTGCGAAGTGCTTGTGATGATGCTGGGGCTCTCCTTGTTTTCGATGAGGTTCAATGTGGTCTAGGCCGAACTGGGCACCTCTGGGCTCATGAGTCCTATGGTGTATTCCCTGACATAATGACACTTGCCAAGCCTCTTGCTGGAGGCCTACCTATTGGTGCTGTACTGGTTACCGAACAAGTTGCTTCTGCCGTAAACTTCGGTGACCATGGAAGCACTTTTGCTGGCAGCCCCCTTGTCTGCAACGCTGCTCTTGCTGTCCTTAAAAAAAATCTCAGAACCCAGCTTCTTGGCCAGTGTCGCCAAGAAGGGCCAATACCTGAAACAAATTTTAACCCAGAAGTTGGGACATAA 447 48.55 MSTIKIAPDLGVERIQGEGGIYSATKEFLQFLRSACDDAGALLVFDEVQCGLGRTGHLWAHESYGVFPDIMTLAKPLAGGLPIGAVLVTEQVASAVNFGDHGSTFAGSPLVCNAALAVLKKNLRTQLLGQCRQEGPIPETNFNPEVGT* 149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22065408 22070479 - Vvi19g1092 Vvi19g1092 782591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1092 148 Pfam Aminotransferase class-III 12 133 IPR005814 GO:0008483|GO:0030170
Vvi19g1092 148 PANTHER ACETYLORNITHINE AMINOTRANSFERASE 11 135 - -
Vvi19g1092 148 SUPERFAMILY PLP-dependent transferases 12 137 IPR015424 -
Vvi19g1092 148 Gene3D - 12 125 IPR015421 GO:0003824
Vvi19g1092 148 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 43 80 IPR005814 GO:0008483|GO:0030170
Vvi19g1092 148 Gene3D Aspartate Aminotransferase, domain 1 126 136 IPR015422 GO:0003824
Vvi19g1092 148 PANTHER AMINOTRANSFERASE CLASS III 11 135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1092 K00818 - vvi:100256445 259.996