Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1094 ATGGATTGTGTAAGCCCCATCCTGGATGTCGCCACTCGCTTGTGGGATTGCACTGCTAAGCGTGCTGTTTACATCCGTCATCTCCCACAAAATCTCAACTCTTTGAGAACTGAAATGGAGGAACTCAAGAACCTGTACGAAGATGTGAAGGAAAGGGTGGAACGTGAAGAGAAACGTCAGAAGAAGCGTCTTCGTGTAGTTGATGGCTGGCTCCGCGGAGTAGAAGCCATGGAAAAAGAAGTGCAGGAAATATTGGCAAAAGGTGATGAAGAAATCCAGAAGAAATGTCTCGGAACCTGTTGTCCTAAAAACTGTGGCGCTAGCTATAAGCTTGGCAAGATGGTACTTGAAAAGATGGATGCTGTGACGGTAAAGAAGAGGGAGGGCTCAAATTTCAGTGTAGTTGCTGAACCTTTGCCTATTCCTCCCGTGATCGAGAGGCAGCTGGACAAGACTGTGGGCCAAGATTTGTTGTTTGGGAAGGTCTGGAAATGGCTCCAAGATGATGGAGAGAAGGTAAGCAGTATCGGATTATATGGAATGGGGGGTGTGGGCAAAACCACCCTCTTGACCAGGACCAACAATGAGCTCCACAAAACCAGGGTTGAATTTGATGCAGTGATTTGGGTGACTGTGTCCAGACCAGCCAATGTGGAAAAGGTTCAGCAAGTTCTTTTCAATAAATTGGAGATTCCCAAAGATAAATGGGAAGGTAGGAGTGAGGATGAAAGGGCAGAAGAAATATTCAATGTCCTGAAGACAAAGAAATTTGTGCTCTTGTTAGATGACATATGGGAGCGGCTGGATCTATCCAAAGTTGGTATTCCTCCTCTGAATCATCAAGATAAGTTGAAGATGGTATTTACAACGCGATCTAAACAAGTATGCCAAAAGATGGAAGCTACCAAGAGCATTGAAGTGAATTGCCTCCCATGGGAGGATGCTTTTGCTCTGTTTCAGACCAAGGTAGGAGCAGACACTATAAGTTCTCATCCAGATATACCAAAGCTGGCGGAGATGGTTGCCAAAGAGTGTGACGGCTTACCACTTGCCCTCATCACCACAGGGCGAGCAATGGCGGGAGCAAAAACACCCGAGGAATGGGAGAAAAAAATACAAATGTTGAAGAATTATCCAGCAAAGTTTCCAGGTACAGAGGAGGATTTGTTTCGAGTATTAGCAATCAGTTATGATAGCCTGCCCGATGAAGCCATCAAATCGTGTTTCCTATATTGCTCTTTATTTCCGGAGGATTATGAAATCTCTCATCGAAAACTTATACAACTTTGGATCGGGGAGGGTTTTCTGGATGAATATGACAACATACAAGAAGCAAGAAATCAAGGAGAAGAAGTTATTAAAAGTTTACAGCTTGCATGTTTATTGGAAAATAAGAACAAATTTGTGGTAAAAGATGGAGTTGAATCGATTAGAGCTCAGGAAGTTGAAAAATGGAAAAAGACACAAAGGATATCATTGTGGGATTCCAACATTGAAGAACTCAGGGAACCACCATATTTCCCTAATATGGAGACCTTTTTGGCATCATGTAAAGTTTTGGACTTGTCAAACAATTTTGAACTTAAGGAGTTACCTGAGGAGATTGGAGACTTAGTTACCTTGCAATATCTTAATTTGTCGAGGACAAGTATTCAATACTTACCTATGGAGCTCAAGAACTTGAAAAAATTAAGGTGCTTGATATTGAAAAATATGTATTTTCTTAAGCCACTTCCATCTCAAATGGTATCGAGTCTTTCCTCTTTGCAATTGTTTAGTAGTTATGACACTGCAAACTCATACTATATGGGAGATTATGAAAGAAGGTTATTAGAAGAGTTAGAGCAGTTGGAACACATTGATGATATATCCATCGACCTTACAAATGTATCATCCATCCAAACATTATTAAACTCCCACAAGTTGCAAAGATCCATAAGATGGCTACAATTAGCTTGTGAGCATGTGAAACTGGTCCAACTATCCCTTTATATAGAGACACTCCGTATTATAAATTGTTTTGAATTGCAAGATGTGAAAATCAATTTTGAAAAGGAAGTGGTGGTCTACTCAAAATTCCCAAGGCACCAATGCTTGAACAACCTTTGTGATATCATTTGGGCGTATTCTCGAGACTCAGATCTCTCGCTTTGTTTTGTTTACCAGAGCTAA 2172 41.11 MDCVSPILDVATRLWDCTAKRAVYIRHLPQNLNSLRTEMEELKNLYEDVKERVEREEKRQKKRLRVVDGWLRGVEAMEKEVQEILAKGDEEIQKKCLGTCCPKNCGASYKLGKMVLEKMDAVTVKKREGSNFSVVAEPLPIPPVIERQLDKTVGQDLLFGKVWKWLQDDGEKVSSIGLYGMGGVGKTTLLTRTNNELHKTRVEFDAVIWVTVSRPANVEKVQQVLFNKLEIPKDKWEGRSEDERAEEIFNVLKTKKFVLLLDDIWERLDLSKVGIPPLNHQDKLKMVFTTRSKQVCQKMEATKSIEVNCLPWEDAFALFQTKVGADTISSHPDIPKLAEMVAKECDGLPLALITTGRAMAGAKTPEEWEKKIQMLKNYPAKFPGTEEDLFRVLAISYDSLPDEAIKSCFLYCSLFPEDYEISHRKLIQLWIGEGFLDEYDNIQEARNQGEEVIKSLQLACLLENKNKFVVKDGVESIRAQEVEKWKKTQRISLWDSNIEELREPPYFPNMETFLASCKVLDLSNNFELKELPEEIGDLVTLQYLNLSRTSIQYLPMELKNLKKLRCLILKNMYFLKPLPSQMVSSLSSLQLFSSYDTANSYYMGDYERRLLEELEQLEHIDDISIDLTNVSSIQTLLNSHKLQRSIRWLQLACEHVKLVQLSLYIETLRIINCFELQDVKINFEKEVVVYSKFPRHQCLNNLCDIIWAYSRDSDLSLCFVYQS* 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22071841 22074329 - Vvi19g1094 Vvi19g1094 782593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1094 723 Gene3D Ribonuclease Inhibitor 479 621 IPR032675 -
Vvi19g1094 723 Gene3D - 310 396 IPR042197 -
Vvi19g1094 723 SUPERFAMILY L domain-like 482 675 - -
Vvi19g1094 723 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 43 665 - -
Vvi19g1094 723 Pfam NB-ARC domain 159 398 IPR002182 GO:0043531
Vvi19g1094 723 Coils Coil 25 63 - -
Vvi19g1094 723 Gene3D - 397 478 IPR036388 -
Vvi19g1094 723 Gene3D - 139 309 IPR027417 -
Vvi19g1094 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 412 IPR027417 -
Vvi19g1094 723 PANTHER DISEASE RESISTANCE PROTEIN RP 43 665 IPR044974 GO:0006952
Vvi19g1094 723 PRINTS Disease resistance protein signature 251 265 - -
Vvi19g1094 723 PRINTS Disease resistance protein signature 175 190 - -
Vvi19g1094 723 PRINTS Disease resistance protein signature 345 359 - -
Vvi19g1094 723 PRINTS Disease resistance protein signature 512 528 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1094 - K13459 vvi:100261532 1338.55