Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1097 ATGAAACTTTATGAAAACAACCATGAGATTCTCGGGGTACTCTCTTTGGTTATCTGGACTTTGACTATTATCCCTCTCTTCAAATATGTTATATTTGTATTAGGAGCTGATGACAATGGTGAAGGTGGAACCTTTGCATTATATTCACTGCTATGTCGACACTCAAAGATGGGCCTACTGAACGCTTCCTATGCTGCACGAGAAAATATATCTTCTTGTGACTCTCAAATTCCAACAGAGGAGACGAGAACTAGTTTACTTCTAAAGGAATTTTTTCAGAAGCATCGGAGTTCACGTATTGTGCTGCTGCTAGTCGTTCTCCTTGGCACAAGCATGGTTATTGGTGATGGAATCCTCACCCCAACAATGTCGGTCCTCTCTGCAGTTATTGGAATTAAAGTGCAGGTTAAGGAGTTGCATGAGAATCATGCTGTCATTATTGCCTGCGTTATCTTGGTGGGACTTTTTGCTCTTCAGCATTTTGGGACACACAAAGTTGGGTTTCTTTTCGCTCCAATTCTGATAGCTTGGCTGCTCTGCATCAGTGGCATAGGCATCTACAACATTATTCACTGGAATCCTCATGTTATCCGTGCTATATCACCACACTACATCTATAACTTTTTTAGGGAAACTGGAAAAGTTGGGTGGAGTTCGCTTGGTGCCATTGTTCTTTGCATTACAGGTGCTGAAGCTATGTTTGCTGATCTAGGCCATTTCTCCAAACTCTCAGTCAGGATTGCATTTACAGCCATTGTTTATCCTTGCTTAATTCTGGCATACATGGGTGAAGCTGCTTACTTGTCCCAAAACCGCACAGATGTTGAACATAGCTTCCACAAGGCTATCCCTAAGCTGATGTTTTGGCCAGTATTTATCATAGCAACTCTTGCAACTGTTGTGGGAAGCCAAGCAATAATTTCAGCTACCTTCTCGATTATTAGCCAGTGTAGGGCACTGAGATGCTTCCCACGGGTGAAAATAGTTCACACTTCAAGCCAAGTGCACGGACAAATTTACATACCAGAGGTGAACTGGATTTTGATGGGATTGTGTATTGCTGTTGCTATCGGTTTTAGAGACATTTCCATGATCGGCCATGCATATGGTCTTGCTGTGATCACTGTAATGTTTGTCACAACTTGTTTGATGTTTCTCATTATTAGTACGGTTTGGAAGCAAAACATTATGGCAGCATCCATGTTTATAGTCATATTTGGATCTGTGGAGCTACTGTATTTCTTGGCATGCATTGCTAAAGTGCAAAGAGGAGGCTGGCTTCCCATCCTCTTCTCTTTAGTCTTCATGTCTCTGATGTCTATCTGGCAGTATGGGACTTCAAAGAAACACCAATTTGAGCTAGAGAACAAGGTATGCTTGGAGAGCCTCTTCAGCCTTGGCCCAAGCCTAGGCATAAGTAGAGTTCCTGGAATAGGCCTAATTTATACCAATCTAGAGTCAGGGGTCCCTCCCATGTTTGCCCATTTTGTCACAAACTTTCCTGCTTTCCACCGGATCCTCATCTTTGTGACGCTCCAGTCATTGATGGTTCCAAAAGTTCCACCTGGTGAGCGTTTCCTTGTTAGCCGGATTGGCTCATCAGAGTTCTACTTGTATCACTGTGTTGTGAGATACGGATACAAGGATGTGAGGGACAGCTATGACTTTGAGACTAAGCTGATCGAGAAAGTGGCAGCATTCTTGCAAAGTGAAGAACTGGCAGTCACGGAGCAGCCGATGGAGAAAGCAGTGGCAACAGGAAATGGGGCTGGTGTTGGTTCTGGCAAGAGGAGAAAGGTGCAGTTCCAATGTGTGGAATTGAACGAGGAAGTGAAGGAACTCATGGAGGCAAGGGAATCTGGTGTGGCATACATGATTGGAAATCCATCTATAATTGCTAATGAGGTGTCATCCCCAGTGAAGAAGTTTGTCATCAACGTTGTCTATGGCTTTCTCCGACGTAATTGCCGCCTACCCGCCATTGCTCTTGGGATTCCACACACCTCCCTGGTTGAAGTGGGCATGGTCTATCATGTCTGA 2040 44.07 MKLYENNHEILGVLSLVIWTLTIIPLFKYVIFVLGADDNGEGGTFALYSLLCRHSKMGLLNASYAARENISSCDSQIPTEETRTSLLLKEFFQKHRSSRIVLLLVVLLGTSMVIGDGILTPTMSVLSAVIGIKVQVKELHENHAVIIACVILVGLFALQHFGTHKVGFLFAPILIAWLLCISGIGIYNIIHWNPHVIRAISPHYIYNFFRETGKVGWSSLGAIVLCITGAEAMFADLGHFSKLSVRIAFTAIVYPCLILAYMGEAAYLSQNRTDVEHSFHKAIPKLMFWPVFIIATLATVVGSQAIISATFSIISQCRALRCFPRVKIVHTSSQVHGQIYIPEVNWILMGLCIAVAIGFRDISMIGHAYGLAVITVMFVTTCLMFLIISTVWKQNIMAASMFIVIFGSVELLYFLACIAKVQRGGWLPILFSLVFMSLMSIWQYGTSKKHQFELENKVCLESLFSLGPSLGISRVPGIGLIYTNLESGVPPMFAHFVTNFPAFHRILIFVTLQSLMVPKVPPGERFLVSRIGSSEFYLYHCVVRYGYKDVRDSYDFETKLIEKVAAFLQSEELAVTEQPMEKAVATGNGAGVGSGKRRKVQFQCVELNEEVKELMEARESGVAYMIGNPSIIANEVSSPVKKFVINVVYGFLRRNCRLPAIALGIPHTSLVEVGMVYHV* 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22109308 22113051 + Vvi19g1097 Vvi19g1097 782596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1097 679 Pfam K+ potassium transporter 5 549 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi19g1097 679 TIGRFAM kup: potassium uptake protein 6 679 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi19g1097 679 Coils Coil 597 617 - -
Vvi19g1097 679 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 679 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi19g1097 679 PANTHER POTASSIUM TRANSPORTER 13-RELATED 1 679 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1097 K03549 - vvi:100259787 1332.39