Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1098 ATGGCGAATAACGAGCTAAGGATCCCTCTGATTCGAACTCCTGGCTCATCAAGTTTCATGAAAGCTAGTTTTAATGGCACAAATGCATTCCTGGGAATTGGTTTTCTAACAATCCCTTATGCCCTCTCAAGTGGAGGTTGGTTGAGTTTGGTGCTCTTCTTCTCAATTGCAGCTATGACCTTTTACACCGGGCTTTTACTAGTGCGTTGTATGGAAGTTGATCCATCTATTTTAAGTTATTATGATATTGCAGAGCGTGCATTTGGTATGAAAGGAAGAATGATAGTCATGTTTATGATGAATGCAGAGATGTACCTTATTGCAACAGGGTTTTTGATATTAGAAGGTGACAACTTACAAAAGCTTTTTCCAGAGTTCATGATCAAACTTGGGGAATTGACACTAGATGGAAAACAGTCATTCGTTATAATCACAGGACTACTATTTTCAGCATTAATGTTGTTAACTGACTTGAGTATGCTCTCCTATATCTCGGCCACTGGAGTATTCTCTTGCCTTGTCATTGTCGTCTCCATCTTTTGTGTTGGTGCATTCGACGGTGTTGGTTTTCATGCAAAAGGAAGTGTTCTGTTAAATCTCGATACTCTTCCTACAGCAGTTGGCTTATATATTGTTTCATTTGGTGGACACCCAGTCATCCCTTCAATATACATGTCTATGCGAGATTCCTGCCAGTTCAGTAAGGTCTTGGTGTTTAGTTTTATTCTGGCAACTCTCAACTACATGACAATAGCGATATTGGGCTATCTTATGTATGGAGATGGTATTGAATCAGAAATTACTTTGAATCTACCAACCAAAGTTAGTGGAAGAGTTGCAATATATACAACTTTACTTATTCCAGTTACTAGATATTCCTTGTTGGTAGCCCCAATTGCAACTGCCATTGAAGGTGGACTATCAGAAAAGTACAAGAATCAGAAACCGGTGAGATTGCTCATAAGAGTAGCATTGCTGATCAGTACTGTTATTGTGGCCTGTGTCTTCCCATATTACGAGTCCTTGATGGCCATTGTTGGGTCAGTTTTTGTTGTTTCGGCTTCTTTTCTGCTCCCATGCTTGTGCTACTTGAAGATTTCTGATCTCAATTGGAATTGGAACTGTGAGCAGATGGGCATTGTTGGGATAATTGTATTTGGAATTTTGGCTGGGTGGGTTTGTACTCTGATCAGCCATCGATTTGCCGAGAAAGAGAGAGATAGCGAGGAGGAGGGAGAGAGGGGTCTTTTGGAAGGTTGGAGATATGGGGCTTTTGACTTGTGCAACGGTCGAATTTGTACGATTCGAAAATATTCAGCTTCAACGGCTAGAGGTTTCAAATTGAACGTGTGA 1353 40.58 MANNELRIPLIRTPGSSSFMKASFNGTNAFLGIGFLTIPYALSSGGWLSLVLFFSIAAMTFYTGLLLVRCMEVDPSILSYYDIAERAFGMKGRMIVMFMMNAEMYLIATGFLILEGDNLQKLFPEFMIKLGELTLDGKQSFVIITGLLFSALMLLTDLSMLSYISATGVFSCLVIVVSIFCVGAFDGVGFHAKGSVLLNLDTLPTAVGLYIVSFGGHPVIPSIYMSMRDSCQFSKVLVFSFILATLNYMTIAILGYLMYGDGIESEITLNLPTKVSGRVAIYTTLLIPVTRYSLLVAPIATAIEGGLSEKYKNQKPVRLLIRVALLISTVIVACVFPYYESLMAIVGSVFVVSASFLLPCLCYLKISDLNWNWNCEQMGIVGIIVFGILAGWVCTLISHRFAEKERDSEEEGERGLLEGWRYGAFDLCNGRICTIRKYSASTARGFKLNV* 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22135683 22139255 - Vvi19g1098 Vvi19g1098 782597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1098 450 Pfam Transmembrane amino acid transporter protein 16 390 IPR013057 -
Vvi19g1098 450 PANTHER AMINO ACID TRANSPORTER ANT1-LIKE 22 398 - -
Vvi19g1098 450 PANTHER OS05G0424000 PROTEIN-RELATED 22 398 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1098 K15015 - vvi:100242701 708.753