Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1100 ATGGCAAACAATGAGCTAAGGATCCCACTGGCACGAACCACTGGATCATCAAGTTTCATTAATGCTTGCTTCAATGGCATAAATGCATTCCTTGGAATTAGTTATCTAACAGTCCCTTATGCCCTCTCAACTGGAGGTTGGTTGAGTTTGATGCCGTTTTCCTTAGTTGCAATTATGACCTTTTACACTGGAATTTTACTAAAACGATGCATGGAAGCCGCTGATCATCCATCTATTACTAGCTACCTTGATATTGCAGGGCATGCATTTGGTACAAAAGGAAGAATCACAGTCATGATCATTATGAATTTGGAAATGTATCTTGTTGCTGTCGGGCTTTTGATACTGGAGGTTGACAACTTGCGTAAGCTATTTCCAGAATTCATGATCAACCTTGGGGAATTAACAGTAGATGGAAGACAGTCATTTGCTATAATCACATTCCTAATAATCTTGCCAACAATATTTTTAACCGACTTGAGCATTCTCTCCTATATCTCTGCCACTGGATTTTTTTCATGCCTTGTCATCCTTGTCTCCATTTTTTGTGTCGGTGCATTCAATGGTGTTGGCTTTCATGCGAAGGGATCGATACTGTTAAATGTGGACCGCCTACCTATTACAGTTAGCTTGTATATTGTTTCCTTTGGTGGACATCCAGTCATCCCTCCAATATATGTATCAATGCGAGACCGCTACCAGTTCAGTAAGGTCTTACTATTCAGTTTTGTTCTTGCAACACTCACCTACATGTCAATGGCCATAGTAGGATATCTAATGTATGGAGACAGGGTTGAATCAGAAATAACTTTGAATCTACCAACAAGTAAAGTTAGTGCAAGAATCGCAATTTATACGACTTTAGTTATTCCAATCGCCAGATATGCATTGGTATTAACCCCAATTGCAACTGCCATTGAAGGCGGGATTTCAGAAAATTACAAGAATAAGAGAGCTGTTAGATTATTTATAAGAGTAGCATTGCTGTTTAGCACAGCTATTGTGGCATATTATTTTCCCTATTACGAGTCCCTGATGGCAATTGTTGGATCAATTTTTGTCGTTTCGGGTTCTTTTCTGCTCCCATGCTTGTGTTACTTGAAGATTTCTGATCTCAATTGGGGTTGGAACTGTGAGCAGATAGGCATTAGGGGGATAATTCTATTTGGAACATTTGCTGGGGTTTTAGGGACTTATTCATCTATTTCTGAACTTGTAAGATAA 1224 39.13 MANNELRIPLARTTGSSSFINACFNGINAFLGISYLTVPYALSTGGWLSLMPFSLVAIMTFYTGILLKRCMEAADHPSITSYLDIAGHAFGTKGRITVMIIMNLEMYLVAVGLLILEVDNLRKLFPEFMINLGELTVDGRQSFAIITFLIILPTIFLTDLSILSYISATGFFSCLVILVSIFCVGAFNGVGFHAKGSILLNVDRLPITVSLYIVSFGGHPVIPPIYVSMRDRYQFSKVLLFSFVLATLTYMSMAIVGYLMYGDRVESEITLNLPTSKVSARIAIYTTLVIPIARYALVLTPIATAIEGGISENYKNKRAVRLFIRVALLFSTAIVAYYFPYYESLMAIVGSIFVVSGSFLLPCLCYLKISDLNWGWNCEQIGIRGIILFGTFAGVLGTYSSISELVR* 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22155044 22157218 - Vvi19g1100 Vvi19g1100 782599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1100 407 PANTHER OS05G0424000 PROTEIN-RELATED 22 406 - -
Vvi19g1100 407 Pfam Transmembrane amino acid transporter protein 16 402 IPR013057 -
Vvi19g1100 407 PANTHER AMINO ACID TRANSPORTER ANT1-LIKE 22 406 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1100 K15015 - vvi:100252952 791.571