Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1101 ATGACCTTCTACACCGGGATTTTACTAAAGCGGTGTATGGAGGCTGATCCATCCATTAGAAGCTACCTTGATATAGCAGAGCGAGCCTTTGGGATGAAGGGGAGGATCATAGTGATGATCATCATGAACTCTGAGCTCTACCTTGTTGCAATAGGGCTTTTGATACTGGAAGGGGACAACTTACATAAGCTATTTCCAAAGTTCATGATCAAGCTCGGGGAATTGACTGCGGATGGAAGACAGTCGTTCGTTTTGATCACTGCCCTCGTCATTTTCCCATCAATGTTGCTAACTGATTTGAGCATACTGTCCTATGTCTCGGCCACCGGTGTGTTTTCTTGCCTTATCATCCTCGTCTCCATTTTCTGCGTGGGTCTATTCAACGGCGTGGGGTTTCATGAAAAAGGAACACTTCTGAATGTCAAGAGCCTTCCTACTGGTGTTAGCTTGTATATCGTCTGCTTCGCGGGACATCCCGTTATCCCTTCCATATACACTTCAATGCGGAACACCTACCAGTTCAGTAAGGTTTTGTTGTTTAGTTTTGTCCTAACGACTTTCACCTACCTAGCAATGGCCATGGTGGGCTACCTTATGTATGGGGACAGCGTAGAATCACAAATAACTTTGAGCCTGCCAACCAGTAAAGTCTGCGCAGAGGTTGCAATATACACCACTTTACTTATTCCAATTACCCGATACGCATTGATGGTAACCCCAGTAGCGACTGCCATTGAAGGCGGGCTTTCAGAAAACTACAAGAATCAGAGAACTGTTAGATTACTCATAAGAGTAGGATTGCTGATTAGTACTGTTATCGTGGCCTATGTATTCCCATATTATGAGTCCCTAATGGCCATTGTTGGATCAATTTTTGTTGTTTCGGCTTCTTTTCTGCTCCCTTGCCTGTGCTACTTGAGGATTAATTCTGATTTGAGATGGGGTTGGAACTGTGAGCAGATGGGGATTGTGGGGATACTTGTATTTGGAACTCTTGCTGGGGTTTTAGGGACTTATTCATCTGTTTATGATCTTGCAATAATTCCTCCTAAATCACTTCTTCTATTTTCATTTTCATTTTTTTGTTTTTTTTCCATCATGTCCTTTTCCTTTCCTTTATATGCATGCTGGAAATTAATTGACCAACCTCTTGGTATTTTTAGTTTAATGAAGTGA 1176 42.43 MTFYTGILLKRCMEADPSIRSYLDIAERAFGMKGRIIVMIIMNSELYLVAIGLLILEGDNLHKLFPKFMIKLGELTADGRQSFVLITALVIFPSMLLTDLSILSYVSATGVFSCLIILVSIFCVGLFNGVGFHEKGTLLNVKSLPTGVSLYIVCFAGHPVIPSIYTSMRNTYQFSKVLLFSFVLTTFTYLAMAMVGYLMYGDSVESQITLSLPTSKVCAEVAIYTTLLIPITRYALMVTPVATAIEGGLSENYKNQRTVRLLIRVGLLISTVIVAYVFPYYESLMAIVGSIFVVSASFLLPCLCYLRINSDLRWGWNCEQMGIVGILVFGTLAGVLGTYSSVYDLAIIPPKSLLLFSFSFFCFFSIMSFSFPLYACWKLIDQPLGIFSLMK* 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22157768 22166597 - Vvi19g1101 Vvi19g1101 782600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1101 391 Pfam Transmembrane amino acid transporter protein 2 341 IPR013057 -
Vvi19g1101 391 PANTHER OS05G0424000 PROTEIN-RELATED 1 345 - -
Vvi19g1101 391 PANTHER AMINO ACID TRANSPORTER ANT1-LIKE 1 345 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1101 K15015 - vvi:100258085 673.7