Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1106 ATGGAAGGTGGTTCTGGTGTAGCATTTGGGTACATACATAAGGATTTGAGGCTTGGAAGTGATGAAATTGCTCGATTACGTGACACAGACTTGAAGAATTTGTTACGCCATAAAAAGCTTTACTTGGTTCTTGATTTAGATCACACACTTCTTAACTCAACTCGGCTTTTAGATATAACACCAGAGGAGCTGTATTTAAAGAACCAAACGGATCCTTTGCAAGGTATGATCTGTTTACCAGTTTATGTCATTATGGCTCATAGAATAACCAATTTTCCAATTTCAATTGTTTATGTTTCTCCAAAGTCTACCGTTTCTTGTTCATGCCATGGGGCCCATAACTTAATTCTATATGTGGAAGGGAGCTAA 369 37.67 MEGGSGVAFGYIHKDLRLGSDEIARLRDTDLKNLLRHKKLYLVLDLDHTLLNSTRLLDITPEELYLKNQTDPLQGMICLPVYVIMAHRITNFPISIVYVSPKSTVSCSCHGAHNLILYVEGS* 123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22256469 22257340 + Vvi19g1106 Vvi19g1106 782605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1106 122 PANTHER BNAC03G12630D PROTEIN 4 76 - -
Vvi19g1106 122 Gene3D - 22 88 IPR023214 -
Vvi19g1106 122 SUPERFAMILY HAD-like 31 65 IPR036412 -
Vvi19g1106 122 PANTHER RNA POLYMERASE II CTD PHOSPHATASE 4 76 IPR039189 GO:0008420|GO:0070940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1106 K18999 - vvi:100253047 242.276