Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1116 ATGGAAGAAACTGATAGATACAACGGCGGTTTCATCGTCGGTGGCGGAGATGGAGACGACGGCGATGAGGCGCAAAGAAGCAGTGTTTTCGCAGAGCTGAAAACCTACTGCTTGGAACTTCTGGGGCTTCTCCAAAATCCTCAGAAACACTCCTCGGCGCTCCCTCAGCTCCTCCGCTTTCTCCGAAAATCTCCCTCCGTTTCCCTTCAACCGTTTCTCGACTACACGTTGTTCCCATTGCTGCTTCTATTGGATGCTGCAGTTGATTGCAGATCCCTAAAAAAGGTTGATTCTGAAGAGAAGTTGATATCTGATGTCCCAAAAATGCCGCATAAGGTGAGCGACAGTGTGGCAGAAGGCGTGCTTCATTGCTTGGAAGAACTTCTTAAGAAGTGCCAATTAGGGTCAGTGGATCAGATGGTTGTGGTGCTGAAGAAATTGACTTACGGGGCTTTGCTTTCTGCATCTGAGGCTGCAGAAGAATTTCGTGAAGGAGTAATTAGGTGCTTCAGGGCACTTATTCTTAGTTTACAACCGTGTTCTGATATGTCATGCTCCTGTAAACAAAGTTTGGGTTTTCCCATACTTTTAGCAAGTGGAGATTTGCAAGTTCCACTCGTTAACACTTCAAAATATGATTCAGAACCAGGAGAATGTTTAATTGCATTTCTCCAGTCTCAAGGTGCTTCAGCTGCTGTTGGACACTGGTTATCTCTTCTTCTAAAAGCTGCAGATACCGAGGCTCAACGAGGACATCGAGGTAGTGCAAAGCTCCGTGTAGAAGCCTTTTTGTCCCTTCGTATGCTTGTCGCTAAGGTTGGTTCTGCAGATGCATTAGCTTTCTTTTTGCCTGGTGTTGTTAGTCAATTTTCAAAAGTTTTGTATGTCTCGAAAACAATGATTAGTGGGGCTGCTGGAAGTGTGGAAGCTATAGATCAAGCAATTAGAGGTGTGGCTGAGTTTCTTATGGTAGTCCTTCGGGACGATGCTAATTTATCGGGTCTTGATAATGTTATTGCTGGCTGTCACACAAACAAGGATGAATCTACACAATCATTTCTGGAGGAGCTCCGCCAGTTGCCTCTTAAAGCTCAAGGACAAAGTGAAACTATAGCAGAAGATTCAAGTGGTGAAATTATTAGTTCCATTTCTCCCAAATTTGGTTTTGAAGAGAAGGGTAGCATTAGTTCTAGAAAAATGTTAGGATCCTTGCATGTAACTCGTACAAAAGATTGGATTGAGAAAACCTCCACACAAGTGGATAAACTATTGTGCACGACTTTCCCAAAAATATGTGTTCATCCAGCAAAAAAGGTGAGAAGAGGACTTTTGGTGGCCATACAAGGACTATTGTCAAAGTGCAGTCACACTCTGAAGAAAAGCAGACTGATGCTTTTGGAGTGTCTATGTGTTTTGGTTTGTGATGACTCTGAAGAGGTGTCTGCAGTTGCACAGGGGTTCCTTGAGTATTTATTTTCATCAAGTGATAAGCATCACATAGAATGTGATGTTGCCGAAATCTTCAGCAGGCTCATTGAAAATCTTCCAAAAGTGGTGCTTGGAAGTGAGGAATCGGTTGCACTGTCCCATGCTCAGCAATTACTTGTACTAATATATTTTTCTGGTCCTCAATTTGTGGTGGATCATCTTCTTCAGTCTCCTATAAAAGCTGCACGGTTCTTGGACGTTTTTGCTCTCTGTCTGAGTCAAAATTCAGTGTTTTCTGGTTCTATAGACAAGCTTCTTTTAGAAAGGCCATCCTCCACAGGATATCTGCAATCTGTTGCTGAGTTGAAATCAAGTATTCGCTTCACCAGTGATGACCAGGCCACCTTGAGTACTGCTCCATATGAGATTTCAAAGTTCGCAGGACTTAAGGATAAAGAGATACAATATCCATTAGAAAACATGCAGAAAGATTATGAGCTTCCACACATGCCCCCTTGGTTTGTTTATGTTGGTAGTCAGAAACTATACAAGGCTCTGGCAGGAATTCTTAGACTTGTAGGCTTGTCTACAATGGCAGACTTCAGAAGTGAAGGCTATTTGTCGGTTATCACTGATATTCCTCTAGGTTACTTTCGTAAATTGGTTTCTGAGGTCCGAATGAGGGAGTATAGTAAAGAAAGTTGGCAGTCTTGGTATCATAGAACTGGTTCAGGGCAGTTATTGCGCCAGGCAAGTACTGCAGCATGTATGCTCAATGAAATGATATTTGGCATATCAGATCAAGCGGTTGAGGATTTTGCAAGGATGTTTCAGAAGCATGAAGCACCCATGATTAATGAGTCTATTTGGAGAGTTTGGCAGGGAAGGGGTGCAAGAAGTCATTTAATTGATTGTATTGGTAATATAATGCATGAATATCTATCTTCTGAAGTGTGGGATCTTCCAACAGAACAGAAATCTTCTCTTCTACAAGCAGATGGTGAAGCTGGAAATTTCTCTCTACACTTTCTCTGTGACACTACTTTGCTACACCAGGAAATATATAGTTTCTTCGTTATTATTGATGGAATAGGCATCTTTAATATCTGCCTTGGAAATGATTTTGCCTCTAGTGGATTTCTTCATTCATCTCTTTATCTATTGCTTGAGAATCTTATTTGTCCAAACTTCCAAATCAGAAGGGCCTGTGATGCAATTTTACATGTTCTTGCTACTACCTCTGGCTACTCAACAGTAGGGCACTTAGTTTTGGAAAATGCGGACTATGTAATTGACTCTATATGTCGACAGTTACGCCATTTGGACCTCAACCCTCATGTACCAAATGTGCTTGGTGCAATGCTTTCCTATATTGGCATAGCTCATAAAATATTACCTCTGCTGGAGGAACCGATGCGCACTGTCTCTATGGAACTAGAGATTCTTGGCAGGCATCAACACCCAGATCTAACTATTCCCTTCTTAAAGGCTGTTGCAGAAATTGCCAAGGCATCAAAGAAGGAGGCTTGTTCAATGCCCATTCAGACAGAATCTTACTCCATACATGTCAAGTCTAAAATGTCTGATGTGGAAAAGAAAGCGAGGGTTGATTCTGGAAAAAGTTCAATATCATGTTACGAGGAGGATATGGATACGTCTCCAGAGGAGTCAGAGGGGGCAGATATCTACTTGAATGATGCTGATATGCATTTAGATGAATGGGAGAGCATTTTATTCAAGTTGAATGATTCGAAAAGATATCGACGAACAGTCGGATCCATTGCCAGTTCATGTTTAACAGCTGCAACCCCACTAGTTGCTTCAGTGAACCAAGCAGCATGCTTGGTGGCCTTGGATATTGTTGAGGATGGCATTGCAACTCTGGCGAAAGTGGAAGAGGCCTATAGGCATGAGAAGGAAACTAAAGAAGCAATTGAACGTGTGATTAAGATGTGTTCATTTTATCATCTCCAAGATACTCTTGATGCTGCTGAGGAAGGAACCGATGAGAATAGGTTGCTTCCTGCAATGAACAAAATATGGCCCTTCTTGGTCGTTTGTATTCGGAACAAGAATCCAGTGGCTGTCCGGAGATGTCTAGATGTGATGAGCAAAGTAATCCACATCTGTGGGGGAGACTTCTTTTCTCGCCGGTTCCACACTGACGGCACCCACTTCTGGAAACTTCTAACCACATCCCCATTTCAGAAGCAACCAGTCTCTAAAGAAGAGAGAATCCCATTACAACTTCCTTACAGAAGTGCTCCTACCTCACCAGAGGACTCAATGGCTGAAGTCTCAACTCTGAAAGTCCAGGCAGCTATGCTTAACATGATTGCGGACTTATCCCTGAACAAAAGGAGTGCTTCAGCATTGGAAGCAGTTCTCAAGAAGGTGAGCGGCCTGGTGGTCGGAATAGCTTGCAGCAGCGTTTCTGGTCTTCGTGATGCAGCCCTCAACGCCCTCACTGGACTTTCTTCAATTGATCCAGATCTCATTTGGCTTCTCCTAGCCGATGTATACTACACTTTCAGAAAGAAACACATCCCTTCACCACCCACCTCTGATTTACCGGAAATTTCCCAGATTTTGCCCCCACCCTCGTCTCCTAAAGACTACCTCTACGTGCAGTATGGAGGACAGAGCTATGGTTTTGATGTTGATTTCTCTTCTGTAGAAATTGTTTTCCAGAAACTGCATTCAGATGTTTTTACTTCACAAATGTACATTTGA 4161 42.8 MEETDRYNGGFIVGGGDGDDGDEAQRSSVFAELKTYCLELLGLLQNPQKHSSALPQLLRFLRKSPSVSLQPFLDYTLFPLLLLLDAAVDCRSLKKVDSEEKLISDVPKMPHKVSDSVAEGVLHCLEELLKKCQLGSVDQMVVVLKKLTYGALLSASEAAEEFREGVIRCFRALILSLQPCSDMSCSCKQSLGFPILLASGDLQVPLVNTSKYDSEPGECLIAFLQSQGASAAVGHWLSLLLKAADTEAQRGHRGSAKLRVEAFLSLRMLVAKVGSADALAFFLPGVVSQFSKVLYVSKTMISGAAGSVEAIDQAIRGVAEFLMVVLRDDANLSGLDNVIAGCHTNKDESTQSFLEELRQLPLKAQGQSETIAEDSSGEIISSISPKFGFEEKGSISSRKMLGSLHVTRTKDWIEKTSTQVDKLLCTTFPKICVHPAKKVRRGLLVAIQGLLSKCSHTLKKSRLMLLECLCVLVCDDSEEVSAVAQGFLEYLFSSSDKHHIECDVAEIFSRLIENLPKVVLGSEESVALSHAQQLLVLIYFSGPQFVVDHLLQSPIKAARFLDVFALCLSQNSVFSGSIDKLLLERPSSTGYLQSVAELKSSIRFTSDDQATLSTAPYEISKFAGLKDKEIQYPLENMQKDYELPHMPPWFVYVGSQKLYKALAGILRLVGLSTMADFRSEGYLSVITDIPLGYFRKLVSEVRMREYSKESWQSWYHRTGSGQLLRQASTAACMLNEMIFGISDQAVEDFARMFQKHEAPMINESIWRVWQGRGARSHLIDCIGNIMHEYLSSEVWDLPTEQKSSLLQADGEAGNFSLHFLCDTTLLHQEIYSFFVIIDGIGIFNICLGNDFASSGFLHSSLYLLLENLICPNFQIRRACDAILHVLATTSGYSTVGHLVLENADYVIDSICRQLRHLDLNPHVPNVLGAMLSYIGIAHKILPLLEEPMRTVSMELEILGRHQHPDLTIPFLKAVAEIAKASKKEACSMPIQTESYSIHVKSKMSDVEKKARVDSGKSSISCYEEDMDTSPEESEGADIYLNDADMHLDEWESILFKLNDSKRYRRTVGSIASSCLTAATPLVASVNQAACLVALDIVEDGIATLAKVEEAYRHEKETKEAIERVIKMCSFYHLQDTLDAAEEGTDENRLLPAMNKIWPFLVVCIRNKNPVAVRRCLDVMSKVIHICGGDFFSRRFHTDGTHFWKLLTTSPFQKQPVSKEERIPLQLPYRSAPTSPEDSMAEVSTLKVQAAMLNMIADLSLNKRSASALEAVLKKVSGLVVGIACSSVSGLRDAALNALTGLSSIDPDLIWLLLADVYYTFRKKHIPSPPTSDLPEISQILPPPSSPKDYLYVQYGGQSYGFDVDFSSVEIVFQKLHSDVFTSQMYI* 1387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22420568 22445496 + Vvi19g1116 Vvi19g1116 782615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1116 1386 MobiDBLite consensus disorder prediction 1 24 - -
Vvi19g1116 1386 PANTHER TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER 23 1379 - -
Vvi19g1116 1386 SUPERFAMILY ARM repeat 35 1344 IPR016024 -
Vvi19g1116 1386 Coils Coil 1104 1124 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1116 K20403 - vvi:100246156 2613.95