Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1127 ATGCTGCTGATGCGATATTGTTCACATAGGTTTCCCATTCCTTGTGAGAAGAGGCTCACAAATTTCAGTCGGAGATCCTGGTTGGCCGCTGCTCGTGGGAATCTCAGTTGTTCCTTCGCACAAAATGGAAATATGGATGTTTCTCTCTCCAATAATTCTACTTTTTCAGGGATGGAGGATGTTTTAATGGGCTATATTTTTGGCAAGGAGAAGGCAACCAGAGTTGCACACTTGGTATGGAAGCATGTTGTCCAAAAAGGAGATACAGTTGTTGATGCCACTTGTGGCAATGGGTATGATACCTTGGCAATGCTCAAAATGGTTGCTGATGGGTCAGGTAGAGGTTGTGTTTATGGAATGGACATTCAAAAAGATGCTTTAGAGAATACTTCTTCATTGCTCAATGAATCGGTCAATCCAATTGAGAAAGAACTTGTTAAGCTCTTCACCATTTGTCACAGTAGAATGGAGGAAGTTGTTCCAAAGAGTACCACATTAAGGCTTGTTGCATTCAACTTGGGCTACCTTCCTGGTGGTGACAAAGAAGTAACTACAACATCAGCAACAACCATCTTAGCATTGCAAGCTGCAACAAGAATATTAGCATCTGGAGGGCTTATCAGCCTGATTGTTTATGTGGGGCATCCAGGAGGAAGGGATGAACTTGAGACCATCCAAGCTTTTGCCTCCGAACTGTCAGTTGAGGATTGGGTTTGCAGTGAATTCCAAATGCTAAACCGACCATTGGCCCCGGTACTCATTTTCTTATTCAAGAGATGA 780 43.08 MLLMRYCSHRFPIPCEKRLTNFSRRSWLAAARGNLSCSFAQNGNMDVSLSNNSTFSGMEDVLMGYIFGKEKATRVAHLVWKHVVQKGDTVVDATCGNGYDTLAMLKMVADGSGRGCVYGMDIQKDALENTSSLLNESVNPIEKELVKLFTICHSRMEEVVPKSTTLRLVAFNLGYLPGGDKEVTTTSATTILALQAATRILASGGLISLIVYVGHPGGRDELETIQAFASELSVEDWVCSEFQMLNRPLAPVLIFLFKR* 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22662520 22670040 - Vvi19g1127 Vvi19g1127 782626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1127 259 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 37 259 IPR010719 -
Vvi19g1127 259 Pfam Putative rRNA methylase 117 256 IPR010719 -
Vvi19g1127 259 Gene3D Vaccinia Virus protein VP39 69 259 IPR029063 -
Vvi19g1127 259 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 220 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1127 - - vvi:100252956 519.235