Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1134 ATGGCTTGGAGCTTCACACCGGATGGTCTCATGGCTTTGAATTTTCCTTCCTTCCATCCCCAAAATTCCCCTCAGTTTCTCTCTTCCCAAACAAAACTTCGCCCATTTTCCTTCCGTTTTTCTCTTCCCAAAAACCAGAAGCCAAGAGCCCTGCGAGAATGGCGGGAGTACGAAGATGCCGTGAAGGAGAAAGACCTCGCTCGAGCCCTTCGGTTCTTGAAATCCGTGGAGACCAATCCAATCGAGCCATTCAACGATTCTTCTTCTTCGGATCTGGGGTTGGTTCAATCGGAGAGGGATTGGGAGGTTCTGGACGCCTGTTTGAATGCAGATGATATGAAGCTTGTTGGGAGCGCCTATTCGTTCCTCAAGAACAGAGGCTTCTTGCCCAATTTCGGAAAATGCAGAAATATTGTTTTGGAGGGATCAAGAGATGTTACGCCAACTGTGTTGAAGACTTCAACTGGTTTAGAAGTGTCTAAACTTTCACCAAAAAAATGGGGTCTTTCGGGAGGCTCAAGTGCTGCTTTAGCAGCTTTTCTTGGTGGGGTATCTCTTCTTCTTTCTCGAGGGATCGATATCAGACCTAACCTTGCAGCCATACTTGGTCTTGCTATCATAGATGCTGTCTTCCTCGGTGGTTCTTGTTTAGCTCAAATTTCAAGTTATTGGCCTCCATATAGGCGTCGGATCCTAGTTCATGAAGCAGGCCATCTGCTGACTGCTTACCTTATGGGTTGCCCAATTCGTGGGGTGATTTTAGACCCAATAGTTGCAATGCAAATGGGCATTCAAGGCCAGGCAGGGACTCAATTTTGGGATGAGAAACTGGAAAAAGAGTTAGCTGAAGGCCGCCTAAGTGGTACTACCTTTGACCGATACTGTATGGTCCTTTTTGCTGGAATTGCAGCTGAAGCTCTTGTTTATGGTGAGGCCGAGGGTGGAGAAAATGATGAGAACTTGTTCAGGAGCATTTGCGTTCTTCTGCGACCTCCATTAACTATTGGACAGATGTCAAATCAGGCAAGATGGTCAGTTCTGCAGTCCTACAACCTGCTCAAATGGCACAAACATGCCCACCGAGCTGCTGTCAAAGCTCTAGAGAGCGGTGGCAGTCTGAGTGTTGTCATCAGGAGGATCGAGGAAGCCATGTCTTCCAGTAGGTGA 1167 47.47 MAWSFTPDGLMALNFPSFHPQNSPQFLSSQTKLRPFSFRFSLPKNQKPRALREWREYEDAVKEKDLARALRFLKSVETNPIEPFNDSSSSDLGLVQSERDWEVLDACLNADDMKLVGSAYSFLKNRGFLPNFGKCRNIVLEGSRDVTPTVLKTSTGLEVSKLSPKKWGLSGGSSAALAAFLGGVSLLLSRGIDIRPNLAAILGLAIIDAVFLGGSCLAQISSYWPPYRRRILVHEAGHLLTAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKLEKELAEGRLSGTTFDRYCMVLFAGIAAEALVYGEAEGGENDENLFRSICVLLRPPLTIGQMSNQARWSVLQSYNLLKWHKHAHRAAVKALESGGSLSVVIRRIEEAMSSSR* 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 22763854 22769558 + Vvi19g1134 Vvi19g1134 782633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1134 388 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE 35 387 - -
Vvi19g1134 388 SUPERFAMILY FtsH protease domain-like 224 373 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Vvi19g1134 388 PANTHER - 35 387 - -
Vvi19g1134 388 Gene3D Peptidase M41 222 376 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1134 - - vvi:100261626 744.962