Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1156 ATGGATTCTTCAACAATGCTGTACAACCAGCTCAAGTCATCAGAACCCTTTTTCTTGTTGGCTGGTCCCAATGTGATTGAATCTGAGGAGCACATTATGTATATGGCCAAAGCCATCAAGAGTCTCACATCAAAATTTGGGTTGAAGCTGGTTTTCAAGTCGAGCTTTGATAAAGCCAATCGAACCTCCTCAAAATCATTTCGGGGTCCTGGCATGATTGAAGGCCTGAAGATCCTTGAGAAGGTCAAAGTAGCATATGACATCCCCATAGTGACTGATGTACATGAAATTGAACAGTGTGAACCAGTTGGCAGAGTTGCAGACATCATTCAGATTCCAGCTTTCCTCTGTCGTCAGACAGATCTCCTAGTCGCTGCTGCCAAGACTGGAAAAATTATCAATATTAAGAAAGGCCAATTTTGTGCTCCCTCTGTCATGGTAAATTCTGCTGAAAAGATCAGATTGGCTGGGAATGAAAATGTGATGGTTTGTGAGAGGGGAACTATGTTTGGCTATAATGATCTGATTGTTGATCCACGCAACTTGGAGTGGATGAGGGAAGCTAATTGTCCTATTGTGGCAGATGTCACACATTCACTACAACAGCCTGCGGGGAGAAAACTGGAAGGCGGAGGTGTTGCCAGTGGAGGTCTTCGTGAATTGATACCATGCATTGCGAGGACAGCAGTTGCTGTTGGAGTGGATGGAATTTTCATGGAGGTGCACAATGATCCTCTAAATGCTCCAGTCGACGGTCCAACACAATGGCCTCTACGCCATTTGGAGGAACTGCTGGAAGAGCTTGTGGCAATAGCTAGGGTAAGCAAGGGGAAGCAACGCTTCAACATTGATCTCACACCAGTCCATGATTAA 873 45.13 MDSSTMLYNQLKSSEPFFLLAGPNVIESEEHIMYMAKAIKSLTSKFGLKLVFKSSFDKANRTSSKSFRGPGMIEGLKILEKVKVAYDIPIVTDVHEIEQCEPVGRVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMVNSAEKIRLAGNENVMVCERGTMFGYNDLIVDPRNLEWMREANCPIVADVTHSLQQPAGRKLEGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHNDPLNAPVDGPTQWPLRHLEELLEELVAIARVSKGKQRFNIDLTPVHD* 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23172290 23185359 - Vvi19g1156 Vvi19g1156 782655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1156 290 Gene3D Aldolase class I 5 284 IPR013785 -
Vvi19g1156 290 SUPERFAMILY Aldolase 12 277 - -
Vvi19g1156 290 Hamap 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 11 278 IPR006269 GO:0005737|GO:0008676
Vvi19g1156 290 Pfam DAHP synthetase I family 15 266 IPR006218 GO:0009058
Vvi19g1156 290 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2 284 IPR006269 GO:0005737|GO:0008676
Vvi19g1156 290 TIGRFAM KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 276 IPR006269 GO:0005737|GO:0008676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1156 K01627 - vvi:100255394 573.933