Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1157 ATGAAAATGACCAAGGTGACGGGCCATAAGCCGCGATCTCTGTTTACACATTTCGTCTGCGCTCCGAAGGCCGATCGATCTCCGAGTTCAAGGAACATGAATTTCAACAATATCAAAGCTCCCAAGGTGCCAGGCGGTGGTGCAGCTTCTGCTTTGATTAAGCTGGGAGTTGTTGGTGGGCTTGGTTTGTATGGAGCTATTAACAGTCTGTACAATGTTGAGGGAGGTCATCGGGCCATTGTGTTTAATCGCATAGTTGGTGTCAAGGACAAGGTTTATCCCGAGGGAACTCACCTGATGATCCCATGGTTTGATAGGCCAGTCATCTATGATGTCCGTACGCGCCCTCATCTTGTGGAGAGTACTTCAGGGAGCCATGACCTCCAGATGGTAAAGATTGGTCTTCGAGTTCTTACCCGTCCTCTGCCAGACCAGTTACCTACAATTTATCGAACCCTTGGTGAGAACTACAATGAAAGAGTCCTGCCTTCAATAATTCATGAAACTCTGAAAGCTGTGGTTGCACAGTATAATGCTAGCCAGCTTATTACTCAGAGAGAGACTGTTAGTAGGGAAATACGTAAGTTATTGACAGAAAGGGCAGCCAATTTCAACATTGCTCTGGATGATGTGTCCATTACAAGCCTTACTTTTGGGAGGGAATTCACTGCTGCTATTGAAGCTAAACAAGTGGCTGCACAAGAGGCTGAAAGGGCCAAATTTGTTGTGGAAAAAGCTGAGCAAGACAAGAGGAGTGCTATTATCAGAGCACAGGGTGAGGCTAAGAGTGCCCAGCTGATAGGTCAAGCTATTGCCAACAATCCAGCATTCATCACGCTCAGAAAAATTGAAGCTTCCCGAGAAATTGCACATACAATTTCAAACTCTGCCAACAAGGTTTTCTTGAATTCCAATGATTTGTTGCTGAACCTTCAGGAAATGAATTTGCAGAGTGCCAGCTGA 963 45.59 MKMTKVTGHKPRSLFTHFVCAPKADRSPSSRNMNFNNIKAPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHLMIPWFDRPVIYDVRTRPHLVESTSGSHDLQMVKIGLRVLTRPLPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKLLTERAANFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANKVFLNSNDLLLNLQEMNLQSAS* 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23186036 23190813 + Vvi19g1157 Vvi19g1157 782656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1157 320 Pfam SPFH domain / Band 7 family 72 247 IPR001107 -
Vvi19g1157 320 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 33 319 - -
Vvi19g1157 320 Gene3D Band 7 domain 98 232 IPR036013 -
Vvi19g1157 320 PANTHER PROHIBITIN 33 319 IPR000163 GO:0016020
Vvi19g1157 320 SUPERFAMILY Band 7/SPFH domain 101 237 IPR036013 -
Vvi19g1157 320 SMART PHB_4 69 230 IPR001107 -
Vvi19g1157 320 Coils Coil 229 249 - -
Vvi19g1157 320 CDD SPFH_prohibitin 70 264 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 113 129 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 131 150 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 154 172 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 177 193 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 200 219 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 225 248 IPR000163 GO:0016020
Vvi19g1157 320 PRINTS Prohibitin signature 248 264 IPR000163 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1157 K17081 - vvi:100250221 548.125