Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g1159 | ATGGTGGACACTTTCGCGACGGGGTATTATAAGAGGCAGCACTTCAGCAAGCCTAAACAAGTGACTGCCGATGAGGAGAGGGGTCAGGAGCATGCAGGGCATGTGCATGTCCACACACATGCCACACATGGCCATGCCCATGGCTCGGCCAGCCCCTCCGATGAGGAAAGCCTCTCCGACCTCATCAGACGCAGAATCGTCTCGCAAGTTTTGGAACTGGGAATTGTGGTTCATTCGGTGATAATTGGAGTCTCCTTAGGCGCCTCTCAAAGGCCAGAAACCATCAAGCCTCTCCTAGCAGCCCTGTCTTTCCATCAGTTTTTCGAGGGGCTGGGGCTTGGGGGCTGCATATCTCAGGCCAAATTCAGGTTCTCAACTATGGCCATGATGGTTCTTTTCTTCTCCGTCACAACCCCAGTGGGAATAGTGCTAGGCATTGGAATATCAAGAATTTACCACGAAAATGGCCCAACTGCACTCATAGTTGAAGGGGTATTTGACGCGGCATCGGCTGGGATCTTGATATACATGGCGCTGGTGGATCTTCTAGCGGCGGACTTCATGAACCCGAGGCTACAGAACAGCCTGAGGCTCCAGTTAGGGGCAAATATCTCCCTTCTTTTAGGGACTGGCTGCATGTCTTTCTTGGCCAAATGGGCTTGA | 663 | 52.34 | MVDTFATGYYKRQHFSKPKQVTADEERGQEHAGHVHVHTHATHGHAHGSASPSDEESLSDLIRRRIVSQVLELGIVVHSVIIGVSLGASQRPETIKPLLAALSFHQFFEGLGLGGCISQAKFRFSTMAMMVLFFSVTTPVGIVLGIGISRIYHENGPTALIVEGVFDAASAGILIYMALVDLLAADFMNPRLQNSLRLQLGANISLLLGTGCMSFLAKWA* | 221 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 23194271 | 23195684 | + | Vvi19g1159 | Vvi19g1159 | 782658 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g1159 | 220 | PANTHER | METAL TRANSPORT PROTEIN | 1 | 220 | - | - | |
| Vvi19g1159 | 220 | Pfam | ZIP Zinc transporter | 21 | 217 | IPR003689 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
| Vvi19g1159 | 220 | PANTHER | ZINC/IRON TRANSPORTER | 1 | 220 | - | - | |
| Vvi19g1159 | 220 | TIGRFAM | zip: ZIP zinc/iron transport family | 1 | 220 | IPR004698 | GO:0005385|GO:0016021|GO:0071577 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi19g1159 | K14709 | - | vvi:100263894 | 392.889 |