Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1160 ATGGAGATGAAAGCAGAGCTGGTCTTCATCCCCATCCCTGAGATTGGCCACTTCCAATCCATGCTTCAGCTCGCCAACCATCTAGTCAGCCGCCACCACGCCCTCTCCGTCACCTTCCTTACCTTCAACGCCTTTTTTGCCTCAGCCCCACCACCACCACCCGCCGCCCCCTCCTTCCCCGGAATCCGCTTCATCACCCTCCCTCAAGTTGACCTTCCTCAACTCGACGACATCTCCGGTGTGGACTGCTATCTTCTCTCTCTCCAGCTCCTGAAACCCCACGTTAAGCACGCGATACAGACCCATGTGCTCGCCTCTGACTCCCCCCAGCTCGCCGGGTTGGTACTGGACCCGTTAGCCTCCGCCATGATCGACCTAGCCGCGGAGCTCGGCGTCGCTTCTTATATCTATTTCCCCAGCGGAGCAGCAATGTTGGAACAAGTGCTTCGTTTCCCAGATCTCGATTCTCAAGTCAGTGAACTCCCTGCCACCAAGTTAACCCTCCCGATTTCAGTCAACTCAGTTCCCCGGCGGGTTCTGCAGACGGCCATGCTGGAAAAAGACGAAGATGGGTACGATCCGATGCTCTACCTAGGACGGAGGTTTCGAGAAGCTAAGGGTATTATCGTAAATACACTCATAGAGTTAGAGCCCGATGTGGCGGAGCTGGTTTCGAATAGGCAGTATCCGCCGGTTTATCCACTTGGACCGTTGATAGACCGGTCTGACTGGACTGATGATCGTATCATCACGTGGCTCGATGGTAAGCTGGCCGGTTCGGTGGTGTTCCTCTGCTTCGGTAGCAGAGGGGCATTGGGTGCGGCTCAGGTGCAAGAGGTAGCGCATGGACTCGAGCGCAGTGGATACAGCTTCCTCTGGTCATTACGCCAGCCGCCGCGGGTGAAACACGCTCTACCCTCAGATTATACGAATCCGGCCGAAGTCTTGCCAGATGGCTTCCTAGATCGCACGGCGGAGAAGGGCTTAGTTTGTGGATGGACCCCACAGTTGAAGATCCTGAGCCATCCATCAATAGGGGGGTTCATTTCCCACGGTGGGTGGAACTCCATCCTGGAGAGTTTGTGGTGTGGTGTACCGATTATGGTGTGGCCTATGTACGCAGAGCAAAAACTCAATGCGTGTAAAATAGTGAGAGAATTGGGATTGGGTGTGGGAGTCACAGAGAATGAGGACTTCATTGACGGTCGAGATTTGTTAATGATTTACACGGACGGTGGAGAGCTAGTAAAGTGCGAAAAGCTGGAGATAGGAGTGAAGAGGTTGATGGACGGTGATAACGAGGTGAGGAGGAAGGTGAAGCAGATGAGTGACACGTTTCGAGAGGCTGTGATGGACGGTGGATCTTCGTTTGTCGTACTGCAACAATTTATTGATGATGTTTTCACCGAAATAAAATAA 1419 53.42 MEMKAELVFIPIPEIGHFQSMLQLANHLVSRHHALSVTFLTFNAFFASAPPPPPAAPSFPGIRFITLPQVDLPQLDDISGVDCYLLSLQLLKPHVKHAIQTHVLASDSPQLAGLVLDPLASAMIDLAAELGVASYIYFPSGAAMLEQVLRFPDLDSQVSELPATKLTLPISVNSVPRRVLQTAMLEKDEDGYDPMLYLGRRFREAKGIIVNTLIELEPDVAELVSNRQYPPVYPLGPLIDRSDWTDDRIITWLDGKLAGSVVFLCFGSRGALGAAQVQEVAHGLERSGYSFLWSLRQPPRVKHALPSDYTNPAEVLPDGFLDRTAEKGLVCGWTPQLKILSHPSIGGFISHGGWNSILESLWCGVPIMVWPMYAEQKLNACKIVRELGLGVGVTENEDFIDGRDLLMIYTDGGELVKCEKLEIGVKRLMDGDNEVRRKVKQMSDTFREAVMDGGSSFVVLQQFIDDVFTEIK* 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23206319 23207782 + Vvi19g1160 Vvi19g1160 782659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1160 472 PANTHER GLYCOSYLTRANSFERASE 4 472 - -
Vvi19g1160 472 CDD GT1_Gtf-like 8 460 IPR002213 GO:0008194
Vvi19g1160 472 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
Vvi19g1160 472 Gene3D Glycogen Phosphorylase B; 247 451 - -
Vvi19g1160 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 467 - -
Vvi19g1160 472 PANTHER GLYCOSYLTRANSFERASE 4 472 - -
Vvi19g1160 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 386 IPR002213 GO:0008194
Vvi19g1160 472 Gene3D Glycogen Phosphorylase B; 7 456 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1160 - - vvi:100248484 923.309