Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1161 ATGGGAATCGAACCTCCATCTCCATATGAAATAAAGAATAAGTACTTGGAAATGGAGTACAAAGATATGGAAGATTATGTGAACCAGCAAAGAGAAAAATGGAAGATATATGGTTGCACCATAATGTCAGATGGATGGACAGGGCCCACGAGATTAAGCATAATTAATTTCATGGCTTATTCAAAAGGGAGTACGGTGTTCCTCAAGTTAGTCGATGCGTCCAACAATATCAAAGACCACAAATACATATACAAGCAATTGAAGAATGTTATAAAAAAAGTCAGGGTAGATGATGTGGTCCAAATTGTCACAGATAACGGGTCAGCGTTCGTGAAAGCAGGGAAGCTGTTGATGAAAAAGTTTAACTTATATTGGACCCCATGTGCGGCATACTGCATCGACTTAATGCTTGAAGACATTAGGAAAAGACCTAGTACTGCAGAGGTAATACGCAATGCCCGCAAGATAACTAACTTCATTTACAATCATTGTTGGTTACTTGCAGAAATGAGAAAGTATTGTGGTGGAGACATTGTTCGACCAGGAGCTACAAGGTTTGCTACAAACTATATTGCTCTTGAAAGTCTTTTTTAA 594 38.38 MGIEPPSPYEIKNKYLEMEYKDMEDYVNQQREKWKIYGCTIMSDGWTGPTRLSIINFMAYSKGSTVFLKLVDASNNIKDHKYIYKQLKNVIKKVRVDDVVQIVTDNGSAFVKAGKLLMKKFNLYWTPCAAYCIDLMLEDIRKRPSTAEVIRNARKITNFIYNHCWLLAEMRKYCGGDIVRPGATRFATNYIALESLF* 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23215253 23216894 + Vvi19g1161 Vvi19g1161 782660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1161 197 Pfam Protein of unknown function (DUF 659) 6 156 IPR007021 -
Vvi19g1161 197 PANTHER OSJNBA0013A04.12 PROTEIN 2 196 - -
Vvi19g1161 197 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 2 196 - -
Vvi19g1161 197 SUPERFAMILY Ribonuclease H-like 30 196 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1161 - - vvi:104877739 343.584