Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1162 ATGGTTCTTTTCTTCTCCGTCACAACCCCAGTGGGAATAGTGCTAGGCATTGGAATATCAAGAATTTACCACGAAAATGGCCCAACTGCACTCATAGTTGAAGGGGTATTTGACGCGGCATCGGCTGGGATCTTGATATACATGGCGCTGGTGGATCTTCTAGCGGCGGACTTCATGAACCCGAGGCTGCAGAGCAGCCTGAGGCTCCAGTTAGGGGCAAATATCTCCCTTCTTTTAGGGACTGGCTGCATCAAACAAATGGAGCCAAAAGTGAAGTTTTCCCTTGATTTTTCCTCCCTTTTCTGTCAACATAAAGCAATGGAATCGCATGATGAAAAGGCTTTTTTCATGATTTTGTATGTGAATAAAGATACATACATAACCATAAGAAATGATTTGGATGCCCCTAGAAAGTTGTATTCCACGTTGGTTTTTGGCCCCTTAACATGCTCAAAAATGCCTCTCACCACCACCACCACCTTCCACATTCCATGGGCTTTTAGGGTTTTTTTTTCCTTGGTGAGAAACAACTACACGGACAATAATATAAACCTCAATTCTCACTTCCATCATCTCTAG 579 43.52 MVLFFSVTTPVGIVLGIGISRIYHENGPTALIVEGVFDAASAGILIYMALVDLLAADFMNPRLQSSLRLQLGANISLLLGTGCIKQMEPKVKFSLDFSSLFCQHKAMESHDEKAFFMILYVNKDTYITIRNDLDAPRKLYSTLVFGPLTCSKMPLTTTTTFHIPWAFRVFFSLVRNNYTDNNINLNSHFHHL* 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23237783 23238509 + Vvi19g1162 Vvi19g1162 782661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1162 192 Pfam ZIP Zinc transporter 1 83 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi19g1162 192 PANTHER ZINC TRANSPORTER 1 1 165 - -
Vvi19g1162 192 PANTHER ZINC/IRON TRANSPORTER 1 165 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1162 K14709 - vvi:100263894 160.999