Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1169 ATGGAAGCACAAAGTGTTATAACTCGGTTTCAAAATTCTGGTGTGTTTCGGACCCAGGGCCTTATTGGAGGAAAATGGACTGAAGCTTATGATGGCAAGACTATTCAGGTCCACAACCCTGCTACTGGTGAAGTTATAGCAGATGTTCCATGCATGGGTCAGCCTGAGACAAACGATGCGATATCTTCAGCTTATGAGATGTTCAATTCTTGGAGCAAAGTTACTGCGATTGAAAGGAGCCAATGCCTGTGGAAATGGCACGATTTACTCATTGCCCATAAAGAAGAGCTTGGTCAACTTATAACACTAGAGCAAGGGAAACCTCTAAATGAAGCCATTATTGAGGTCATCATTGCGGCTGGCTACCTTGAGTTCTTTGCAGAGGAAGCAAAACATGTATATAGTGATATAATTCCATCGACAGTAGCTGATTGCCAGTTGTTTGTTATAAAACAGCCTGTTGGTGTTGTTGGTGCAATTACTCCATGGAACTTTCCGTTGGCTATGCTTACTTCGAAGGTTGGCCCTGCCCTAGCTTGTGGCTGCACGGTGGTTTTAGAGCCCTCTGAACTTACACCCTTGATAGCCTTCGCAGCAGCTGGGCTTGCGCTTGAAGCAGGAATACCATCGGGTGCTCTGAATGTTGTCACGGGAAATGCTCCTGACATTGAGCATGCTTTACTTGCAAGTCCAAAGGTAAGAAAAATAACATTTACAGGCTTGTCAGCTGTTGAAAAGAAGATAATGCCAGGTGCTGGTGAGACTCTTAGAAAGGTATCTCTTGAACCTGGCGGTAATGCACCTTGCATAGTTTTTGATGACACGGACCTGGGCGTGGCAGTAAAATCAATTCTGGCCGTGAAATTCCATAATAGTGGGCAAACATGTATTTCTGCCAATAGAATACTTGTGCAAGAAGGTATTTATGAAAAATTTGCCACTGCTTTTTCTAAAGCTGTCACAAGTCTGCAAGTTGGGGATGGGTTTTGTGAAGGTGTGACCCAGGGTCCACTAATTAATGAAGCTGCAGTGCAAACGGTTGAGTCATTAGTTCAAGATGCTATCTCAAAGGGAGCAAAACTCCTCCTTGGGGGTAAAAGACACAATCTGGGGATGACTTTTTATGAGCCCACAGTAATCGGTGATGTCAACAACAAGATGCTTATATCAAGGAACAAGATATGTGGACCTATTGCTGCCCTTCTGCGTTTTAAAACCGAGGAGGAAGCCATCTGCATTGCAAATGACACTGATGAAGGTTTAGCTGCCTATATTTTCACAAAAAACCTACAACGATCTTGGCGTGTCTCTGAAGTTCTTGAATATGGACTTGTTGGTGTCAGTGAAGGATTAATTCCGACAGTGATGGCTCCGGTTAGTGGGTTTAAGAATACTGGTCTTGGACAAGAAGGATCCAAAAAGGGCATGCTTGAATATCTGGAATTAAAATATATATGTTTGGGAAATATGAATAATATCTGA 1482 43.12 MEAQSVITRFQNSGVFRTQGLIGGKWTEAYDGKTIQVHNPATGEVIADVPCMGQPETNDAISSAYEMFNSWSKVTAIERSQCLWKWHDLLIAHKEELGQLITLEQGKPLNEAIIEVIIAAGYLEFFAEEAKHVYSDIIPSTVADCQLFVIKQPVGVVGAITPWNFPLAMLTSKVGPALACGCTVVLEPSELTPLIAFAAAGLALEAGIPSGALNVVTGNAPDIEHALLASPKVRKITFTGLSAVEKKIMPGAGETLRKVSLEPGGNAPCIVFDDTDLGVAVKSILAVKFHNSGQTCISANRILVQEGIYEKFATAFSKAVTSLQVGDGFCEGVTQGPLINEAAVQTVESLVQDAISKGAKLLLGGKRHNLGMTFYEPTVIGDVNNKMLISRNKICGPIAALLRFKTEEEAICIANDTDEGLAAYIFTKNLQRSWRVSEVLEYGLVGVSEGLIPTVMAPVSGFKNTGLGQEGSKKGMLEYLELKYICLGNMNNI* 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23341371 23351231 + Vvi19g1169 Vvi19g1169 782668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1169 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 454 IPR016163 GO:0016620
Vvi19g1169 493 CDD ALDH_F5_SSADH_GabD 37 487 - -
Vvi19g1169 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 479 IPR016162 GO:0016491
Vvi19g1169 493 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 14 490 - -
Vvi19g1169 493 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 14 490 - -
Vvi19g1169 493 SUPERFAMILY ALDH-like 11 490 IPR016161 GO:0016491
Vvi19g1169 493 Pfam Aldehyde dehydrogenase family 26 484 IPR015590 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1169 K17761 - vvi:100251993 948.347