Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1172 ATGGAGGGCCCAGATCCTGAAATGCAAGAAGAAGGAACCAAGAAGGAGAGTTCCTGGGAGGTCATCAGAGAATGGTTCCGCCTGCAGAAGGGTGGCGGCCTTGGGGTTCATGGAAGCAGTAGCTTCTCCCTCTCTTTATATGGAAACATCCCCTCCAAAACCCAAGACTTGAGGCTTCTGCTAGGCGTCCTGGGCTGCCCTCTCGCCCCCATCCCCCTCGCCACTGACCCACTTCACCGTCTCCATATCAAGGACATCCCCATAGAGACGTCGAGTGCCTGTTACATCATACAGCAGTACTTGGCGGCAACGGGGTGTCTGAAGCAAGAGAAGGGGATGAAAAATATGTACACCACGGGGACGATGAAGATGATATGCTGCGAAACGGAGATATCGACGGGGAAGAGTGTGAAGAGCTTGGGGACGAGGAGTGGGGAGAATGGGTGCTTTGTGCTCTGGCAAATGTCTCCCGGAATGTGGTCTCTGGAGCTGGTGGTGGGTTGCAACAAGGTCGTCGCCGGCAGTAACGGCAAGATCGTCTGGCGCCACACCCCTTGGCTCGGCACCCACGCCGCCAAAGGCCCCCACCGCCCTCTCCGGCGCATCATTCAGGGTTTGGATCCAAAGAGCACGGCTAGCCTGTTCGCCAAAGCCCAATGCTTGGGCGAGAAACGGATAGGAGAAGATGACTGCTTTGTCCTAAAGGTGGCGGCCGACCGGGCGGCAGTGATGGAGAGAAATGAAGGCCCTGCAGAGGTGATAAGGCACGTACTATATGGATACTTCAGCCAAAAGAGTGGCCTCCTAATATACCTAGAGGACTCACACCTCACAAGGGTTCAAGCTCCTGGAAATGACACAGTCTACTGGGAGACCACCATAGGAACCAGCCTGTGGGACTACCGGGACGTCGATGGCGTGATGATCGCGCACGAGGGGCGGACCATCGCCACGGTTTTTCGGTTTGGAGAGGTGTCCATGCAGCATAGCAGGACAAGGATGGAGGAGCTGTGGGTGATAGATGATGTAGTGTTCAATGTTCCTGGCCTCTCCTTTGATTACTTCATTCCTCCTGCTGATATTTTTGATGTTGATAACTCACCATGA 1107 54.83 MEGPDPEMQEEGTKKESSWEVIREWFRLQKGGGLGVHGSSSFSLSLYGNIPSKTQDLRLLLGVLGCPLAPIPLATDPLHRLHIKDIPIETSSACYIIQQYLAATGCLKQEKGMKNMYTTGTMKMICCETEISTGKSVKSLGTRSGENGCFVLWQMSPGMWSLELVVGCNKVVAGSNGKIVWRHTPWLGTHAAKGPHRPLRRIIQGLDPKSTASLFAKAQCLGEKRIGEDDCFVLKVAADRAAVMERNEGPAEVIRHVLYGYFSQKSGLLIYLEDSHLTRVQAPGNDTVYWETTIGTSLWDYRDVDGVMIAHEGRTIATVFRFGEVSMQHSRTRMEELWVIDDVVFNVPGLSFDYFIPPADIFDVDNSP* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23399296 23401496 - Vvi19g1172 Vvi19g1172 782671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1172 368 Pfam Protein of unknown function (DUF620) 116 358 IPR006873 -
Vvi19g1172 368 PANTHER PLANT/T8K14-16 PROTEIN 1 364 - -
Vvi19g1172 368 PANTHER LIPASE 1 364 IPR006873 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1172 - - vvi:100246643 755.362