Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g118 ATGGCTCGCGAGAACTTCGTCTACATAGCTAAGCTCGCTGAGCAAGCCGAGAGATACGATGAAATGGTGGATGCGATGAAGAAAGTGGCGAAGCTGGATGTGGATTTGACTGTGGAAGAGCGGAATTTGCTTTCGGTTGGGTACAAGAACGTGATCGGAGCGCGAAGGGCTTCCTGGAGGATCCTATCGTCGATCGAGCAGAAGGAGGAGGTGAGAGGGAATGAGCAGAACGCAAAGCGGATCAAGGAGTATAGGCAGAAGGTGGAATCTGAGCTGTCGGGTATTTGTAGCGATATTATGACTGTGATTGATGAGCATCTGATTCCGGCTTCTACGGCTGGTGAATCCACTGTTTTTTACTATAAAATGAAAGGGGATTATTATCGGTACCTGGCGGAGTTCAAGACCGGCAATGAGAGGAAAGAGGCGGCTGATCAGTCTCTTAAGGCATACCAGACGGCTTCTACTACTGCAGAGAGCGATTTATCCCCCACTCATCCCATCCGATTGGGTTTGGCTTTAAATTTTTCTGTCTTCTATTATGAGATTATGAATTCACCTGAAAGGGCTTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGTTGGACACCCTTAGCGAGGAATCTTACAAAGACAGCACTTTAATTATGCAGCTCTTAAGGGATAACCTTACTTTGTGGACTTCTGACATCCCTGAGGATGGAGGAATTCACTTTACCTCCAAATATGCGCGTCATGTGCAAGAAAGACGGTCAACTCTCTCTTTCTTAGTTAAGACCAGAAGATGGAAAGCTCTGCCAAAGCTGGTGGAGACGATGAGTGAAGCTGAGGAGAGGAGAGCCTCACAGCCCTTTATTGTGTGA 873 46.96 MARENFVYIAKLAEQAERYDEMVDAMKKVAKLDVDLTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEVRGNEQNAKRIKEYRQKVESELSGICSDIMTVIDEHLIPASTAGESTVFYYKMKGDYYRYLAEFKTGNERKEAADQSLKAYQTASTTAESDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGIHFTSKYARHVQERRSTLSFLVKTRRWKALPKLVETMSEAEERRASQPFIV* 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1489144 1494170 + Vvi19g118 Vvi19g118 781617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g118 290 Coils Coil 9 29 - -
Vvi19g118 290 SUPERFAMILY 14-3-3 protein 2 233 IPR036815 -
Vvi19g118 290 PANTHER 14-3-3 PROTEIN 3 238 IPR000308 -
Vvi19g118 290 SMART 1433_4 3 244 IPR023410 -
Vvi19g118 290 ProSitePatterns 14-3-3 proteins signature 1. 41 51 IPR023409 -
Vvi19g118 290 Gene3D - 1 240 IPR036815 -
Vvi19g118 290 PIRSF 14-3-3 1 242 IPR000308 -
Vvi19g118 290 PRINTS 14-3-3 protein zeta signature 35 64 IPR000308 -
Vvi19g118 290 PRINTS 14-3-3 protein zeta signature 84 108 IPR000308 -
Vvi19g118 290 PRINTS 14-3-3 protein zeta signature 115 137 IPR000308 -
Vvi19g118 290 PRINTS 14-3-3 protein zeta signature 150 176 IPR000308 -
Vvi19g118 290 PRINTS 14-3-3 protein zeta signature 177 203 IPR000308 -
Vvi19g118 290 PRINTS 14-3-3 protein zeta signature 204 233 IPR000308 -
Vvi19g118 290 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 238 - -
Vvi19g118 290 Pfam 14-3-3 protein 10 231 IPR023410 -
Vvi19g118 290 ProSitePatterns 14-3-3 proteins signature 2. 213 232 IPR023409 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g212 Vvi19g118 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g118 K06630 - vvi:100250345 468.388