Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1186 ATGGCCTCTCAATTCCATCCTCACAACCATGCTCTCGAAGAAATGATTAGGAACCTCAAGGTTGATCCTTGTAGTCAACTGGGTGGTCCTCCAAAGGAAGGAAGCCCATCTGATGCAACATCATCTGGAGAAGCAACGGGAAGTGTTAAAGAAAGTGAAGTGGATCAAGAGTCCTTGACAACAGAACCACCACCAGTCATGCCTCCTCACACACCATCATATTATGGATACTACTATCCAGGTTTTGATGGTTCCTTTGCTGAATTGGATGACCAAGGACTGCCTTTGGAGATTCAGTATCCTGTCATGCAAGCAGATAATGGATCTCTCCTTTACTTCACACCAGGATTCCAACCTGGTTACAGCCTCTACAGCCCCGTTGTACCTGTAGCCACGATTGGTGTTGATGGACAGTATGCTGGTCAACACCCATATCCGCCAAGCACTGTGTTTGCACCAGCTATTGCTTCCCCTGGATATATTCCAACCCCTCTCCCCTATGGGTCAGAGTTGTTGCCATCATCTTACTTGTGGGATCCATCTTTTCTAGTTGGAGATGGAGCATATGGAAGTGGTTATATTGGAGTTCCAGATATTGCAGACTCCAAACAAAATTTATCCTCCCCCAGTCATCCTCGTAATCCTCCCTCAAAATCCTTTTCACTTTCTGAGTTCAACAGTCCATTAGAAGTTAAAGGCAGCTCACCATCATCGGTTCATGGCATGCGCAGTCAATTCAAATCAGCAAACAAGGCCTCCCAATATGGTTCACCTTTCCAACCAGATGATGCTCTGGGCAAGGATTACTTTCCGATTGCAAAACTTCAATCCTATAACCAGGGAAAGGGTGGATTACTCTATCCCAACAGCCCTGTTAATCTAAAAGCAAATAGTAGGGGTTGGGTTAGCACAGAAAAGCTGAAAATGAGAAGCAAGGCTAATGCTATTAGTGATTTTGGGGTGCTTGAGCAGAACCATGGTCCCAGAACAGCCAGTGCCAAGGGCGCTTTGGTGTCTGGAGGTAATGATGCTGGATCTCTTTCTGCTGATGGGAATGGAAAGAATAACTGCATAGCCTCGTTGATCAGGAGGGATCAATATAACCTTCCTGACTTTCCGACTAAATATGATCACGCGTTCTTCTTTGTCATCAAATCTTATAGTGAAGATGATATTCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACTCCGAATGGCAATAAGAGGTTGGATGGTGCATATCAGGAAGCAAAGGAAAGGATGGGAGACAGAGGCAGCAAGTGTCCCGTGTTTCTTTTCTTTTCGGTTAATGCAAGTGGGCAGTTCTGTGGAGTAGCTGAGATGATTGGCCGAGTTGATTTTAATAAGAACATGGACTTCTGGCAACAGGATAAGTGGAATGGATTTTTCCCTGTCAAGTGGCACATCATAAAAGATGTTCCAAACCCACAGTTGCGGCATATAATACTTGAGAACAACGACAACAAGCCTGTGACCAATAGCAGAGACACACAGGAGGTGAGATTTCCTCAGGGGATCGAAATCTTGAACATTTTTAAGAACTATGTGTCAAAGACATCTATATTGGACGACTTCGATTTTTATGAAAGCCGCCAAAAGGTGATGCAAGACAAGAAAATCAAGCCATCTATGCCACATTTTGATCATCTACAGCAGAAAGCAGAAGACGTGATCACTGGTTTTCAGGCGGTGGATCTGTCTGCTGTGGAGAAGATTGAAGAACCTCAGGTGGGAGACAAAGCAAACGAATGA 1776 44.43 MASQFHPHNHALEEMIRNLKVDPCSQLGGPPKEGSPSDATSSGEATGSVKESEVDQESLTTEPPPVMPPHTPSYYGYYYPGFDGSFAELDDQGLPLEIQYPVMQADNGSLLYFTPGFQPGYSLYSPVVPVATIGVDGQYAGQHPYPPSTVFAPAIASPGYIPTPLPYGSELLPSSYLWDPSFLVGDGAYGSGYIGVPDIADSKQNLSSPSHPRNPPSKSFSLSEFNSPLEVKGSSPSSVHGMRSQFKSANKASQYGSPFQPDDALGKDYFPIAKLQSYNQGKGGLLYPNSPVNLKANSRGWVSTEKLKMRSKANAISDFGVLEQNHGPRTASAKGALVSGGNDAGSLSADGNGKNNCIASLIRRDQYNLPDFPTKYDHAFFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAYQEAKERMGDRGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVTNSRDTQEVRFPQGIEILNIFKNYVSKTSILDDFDFYESRQKVMQDKKIKPSMPHFDHLQQKAEDVITGFQAVDLSAVEKIEEPQVGDKANE* 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23780411 23784906 - Vvi19g1186 Vvi19g1186 782685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1186 591 MobiDBLite consensus disorder prediction 203 257 - -
Vvi19g1186 591 MobiDBLite consensus disorder prediction 35 54 - -
Vvi19g1186 591 MobiDBLite consensus disorder prediction 20 70 - -
Vvi19g1186 591 Gene3D ph1033 like domains 359 535 - -
Vvi19g1186 591 PANTHER OS01G0679900 PROTEIN 31 565 - -
Vvi19g1186 591 Pfam YT521-B-like domain 381 521 IPR007275 GO:0003723
Vvi19g1186 591 ProSiteProfiles YTH domain profile. 379 520 IPR007275 GO:0003723
Vvi19g1186 591 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 31 565 IPR045168 -
Vvi19g1186 591 MobiDBLite consensus disorder prediction 203 260 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1186 K20102 - vvi:100258644 1211.05