Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1188 ATGAACAAAGGCGGAGGCGCCGGTGGAGGGCCAACAGCAGCGGCGGCAGCGGCGGCGGCTCAGAAACAGAAAACTTTGTTGCAGAGAGTTGAAACTGACATCGCTAATGTGGTTGATCACTTCACTTTCTTAGTTAACGTTGCTCGGGTGAATGACCCGCCAGTCAGAAATTCACAGGAGGCTTTCATGATGGAGATGCGTGCAGCCAGAATGGTTCAAGCAGCTGACTCACTACTGAAGTTGGTGTCAGAGCTGAAGCAGACTGCAATCTTTTCAGGATTTGCATCTCTTAATGACCATGTAGATCAAAGAGAGGCTGAGTTTAACCAACAGGCAGAAAAAACTGACCACTTGTTAGCTAGAATTGGAGAGGAGGCAGCTGCTAGCCTCAAGGAGCTTGAATCTCATTATTATTCTTCTGCACAGAGGACAAGCGAACCCCCACAGCCATGA 453 49.01 MNKGGGAGGGPTAAAAAAAAQKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSSAQRTSEPPQP* 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23817846 23823394 + Vvi19g1188 Vvi19g1188 782687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1188 150 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 1 147 IPR009332 GO:0003712|GO:0006357|GO:0016592
Vvi19g1188 150 Pfam Surfeit locus protein 5 subunit 22 of Mediator complex 28 127 IPR009332 GO:0003712|GO:0006357|GO:0016592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1188 K15139 - vvi:100253502 248.825