Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1199 ATGCCAATTCATTGGTATCTTTGTGTCATTGACTTTAAGAACTCTCATATCCAAATTTTGGATTCATTACGATCAAGGAGTCGGGACGAGTTTCGGTTTAAGAATGTCAAAACAGTGGTTGAATTTTGTCAAACGTTCTTCAAACTCTATGACATAGGGAAAGATATCTTCCAATTCTCCATTAATTGGGTTCCTTCGATTCCAACCCAAGATAATGGGTTAGTATGA 228 36.4 MPIHWYLCVIDFKNSHIQILDSLRSRSRDEFRFKNVKTVVEFCQTFFKLYDIGKDIFQFSINWVPSIPTQDNGLV* 76
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 23998363 23999284 + Vvi19g1199 Vvi19g1199 782698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1199 75 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 2 73 - -
Vvi19g1199 75 SUPERFAMILY Cysteine proteinases 3 73 IPR038765 -
Vvi19g1199 75 Pfam Ulp1 protease family, C-terminal catalytic domain 3 73 IPR003653 GO:0006508|GO:0008234
Vvi19g1199 75 Gene3D Adenoviral Proteinase; Chain A 2 74 - -
Vvi19g1199 75 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 2 73 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1199 - K18596 vvi:104881229 136.732