Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1200 ATGGTTTTTAATGATGTTTTAAGTGTTTATATGGGGGCATTCTTAGTTATTTATAATTGTGTTTGTTTTTTTGTTTATTTGTTTGTATGCTTTTTTTTTTTTTTATGCAGTATGATGAATGCATCTTCTGAAGGGCTTGTATTGGCTGACAGAAGTGGACTGAACCCTCATACTCTTCTTGATGTATTGGACCTGGGTGGAATTGCTAATCCAATGTTCAGGTTGAAAGGACCAACAATGATACAAAACAGTTACTCTCCTGCATTTCCTCTGAAACATCAGCAGAAGGATATGAGGTTGGCTCTTGCTCTTGGGGATGGAAATGCGTATCTATGCCAGTAG 342 36.84 MVFNDVLSVYMGAFLVIYNCVCFFVYLFVCFFFFLCSMMNASSEGLVLADRSGLNPHTLLDVLDLGGIANPMFRLKGPTMIQNSYSPAFPLKHQQKDMRLALALGDGNAYLCQ* 114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 24013270 24013696 + Vvi19g1200 Vvi19g1200 782699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1200 113 Gene3D - 16 110 IPR013328 GO:0016491
Vvi19g1200 113 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 32 107 IPR008927 -
Vvi19g1200 113 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 37 106 IPR029154 GO:0051287
Vvi19g1200 113 PANTHER OXIDOREDUCTASE GLYR1-RELATED 34 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1200 K18121 - vvi:100246579 141.739