Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g191 ATGGCTGGCAAAGAAATCATCAATAAGATGAAGGAAAAAGTTGGGTTGGGTTCATCTTCCTGTGACACTGGCAAAGGGAAGAGCAAGATGTCAAAGAACATAACACATGGCTATCACTTGGTAAAGGGAAAATCAAACCATGCCATGGAAGATTATGTTGTTGCACAATTTAAGAAAGTTGATGACAAAGAGCTTGGTCTGTTTGCAATATTTGATGGTCACTTGAGCCATGATATTCCTAATTATTTGCGGTCTCATTTATTTGATAATATTTTGACAGAGCCTGACTTCTGGACTGAAACGGAGGAGGCAATTAGAAGAGCATATCATAATACTGATACTACAATTTTGGAGAAATCAGCTGATTTGGGTAAAGGGGGATCAACAGCAGTTACAGCAATATTAATTAATGGGCATAAGTTGATAGTAGCCAATGTCGGGGATTCTCGAGCTGTCATATGCAGAAATGGGGTGGTCAAACAACTATCAGTTGATCATGAGCCGAGCAAGGAACGAAAGAACATTGAGGACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGATGTTCCTCGTGTTGATGGGCAGTTGGCTGTTGCAAGGGCTTTTGGTGACAAGAGCTTGAAGGGACACCTCAGTTCAGAACCAGATGTGGTGGTAGAGCACATACATGATGATACAGAGTTTGCTATTTTGGCAAGTGATGGATTATGGAAGGTAATGACGAACCAAGAAGCAGCAGACTCAATCAAGAACATAAAGGATGCCAGGGCTGCAGCAAAGCACCTTACTGAAGAGGCACTGATTAGGAAGAGCACAGACGATATCTCCTGCATAGTAGTAAGATTCCAGTGA 852 42.02 MAGKEIINKMKEKVGLGSSSCDTGKGKSKMSKNITHGYHLVKGKSNHAMEDYVVAQFKKVDDKELGLFAIFDGHLSHDIPNYLRSHLFDNILTEPDFWTETEEAIRRAYHNTDTTILEKSADLGKGGSTAVTAILINGHKLIVANVGDSRAVICRNGVVKQLSVDHEPSKERKNIEDRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKGHLSSEPDVVVEHIHDDTEFAILASDGLWKVMTNQEAADSIKNIKDARAAAKHLTEEALIRKSTDDISCIVVRFQ* 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2464854 2470707 + Vvi19g191 Vvi19g191 781690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g191 283 Gene3D - 17 283 IPR036457 -
Vvi19g191 283 CDD PP2Cc 36 282 IPR001932 -
Vvi19g191 283 Coils Coil 245 265 - -
Vvi19g191 283 SMART PP2C_4 25 280 IPR001932 -
Vvi19g191 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Vvi19g191 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Vvi19g191 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Vvi19g191 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Vvi19g191 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi12g270 Vvi19g191 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g191 K17506 - vvi:100241870 567.385