Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g222 ATGGCTTCCTTGAAAAACGTTGGAGCTCTAACTCTCCTTCTTCTCCTCCTACTTTCATTGACAGTGCAAACTTCCGGCAAGGAAGATGCCAGCGGAGCGGGATCGAAATGTGGTGATCCCAAAGGAGGATCCGAGGAAAAGGCATCAGCCTTAAAGCTGAAGGTGATAGCAATATTCTCGATACTGATTGCTAGCATCTTGGGCATCTCTTTTCCCATACTTCTACAAGGCATGCCACTGCTTAAACCGGATGGAAAATTGTTCGTTTTGATTAAGGCATTCGCGTCGGGGGTTATCCTGGCCACAGGCTACGTTCACGTGCTGCCGGATTCAATTGAGAGCTTGACTTCTCCATGTCTGCCGCAGGCTCCATGGAGCAAATTCCCATTTTCAACGTTCATAGCCATGGTTGCAGCGGTTTTAACACTGATGATGGATTCTTTTGCAATGAGTTATTACAAGAAACATGGAATGAGTGGAGCAGAATGCGAATATGGGGATCACATAGAGAATGATCAGGGACATTCTCATGGACACGGACATGGAGTTGGTGTGAAGAAGCTTGATGACGAATCCTCAAAACTATTGAGATATCAAATTATCGCTCAGGTGCTAGAACTGGGAATTGTGGTCCACTCAGTGGTGATTGGGCTGTCAATGGGGGCCTCTGAAAATGCCAGTACAATCAGGCCCCTCATTGCTGCTCTTTGTTTCCATCAATTCTTTGAAGGAATGGGGCTTGGAGGATGCATTCTACAGGCTGAATACAAGGCAAGGACGAAGGCCATCATGGTGTTTTTCTTCTCGGTCACCACCCCCTTGGGGATCGCGCTGGGAATCGGCTTATCAAAGGTGTACAGCGACGACAGCCCGACGGCTCTGATAGTGGTTGGAGTGCTGAACGCTACATCTGCTGGGCTACTGAATTACATGGCGCTGGTGGACCTGCTGGGCGCTGATTTCATGGGCCCCAAATTGCAATCAAACATGAAGCTTCAAATGTGGGCTTATGTCGCTGTCATATTGGGCGTTGGTGGCATGTCCGTGATGGCAATATGGGCGTGA 1065 48.54 MASLKNVGALTLLLLLLLSLTVQTSGKEDASGAGSKCGDPKGGSEEKASALKLKVIAIFSILIASILGISFPILLQGMPLLKPDGKLFVLIKAFASGVILATGYVHVLPDSIESLTSPCLPQAPWSKFPFSTFIAMVAAVLTLMMDSFAMSYYKKHGMSGAECEYGDHIENDQGHSHGHGHGVGVKKLDDESSKLLRYQIIAQVLELGIVVHSVVIGLSMGASENASTIRPLIAALCFHQFFEGMGLGGCILQAEYKARTKAIMVFFFSVTTPLGIALGIGLSKVYSDDSPTALIVVGVLNATSAGLLNYMALVDLLGADFMGPKLQSNMKLQMWAYVAVILGVGGMSVMAIWA* 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2760836 2762169 - Vvi19g222 Vvi19g222 781721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g222 354 Pfam ZIP Zinc transporter 52 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi19g222 354 PANTHER ZINC/IRON TRANSPORTER 28 354 - -
Vvi19g222 354 PANTHER ZINC TRANSPORTER 7 28 354 - -
Vvi19g222 354 TIGRFAM zip: ZIP zinc/iron transport family 43 354 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g222 K14709 - vvi:100241788 659.833