Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g246 ATGGCAGAAAATGAAAAGGAAACACGATCTTTGGCCTTAACGCCAACATGGTCTGTGGCACTTGTCTTGTCGATCTTTGTTGCTGTTTCCTTGCTTGTGGAGCGCTCAATCCACCGACTAAGTAATTGGTTGCGGAAAACTAGTCGAAAGCCTTTACTTGAAGCTGTTGAGAAAATGAAAGAAGAGCTGATGTTGCTTGGATTTATATCTCTCCTTCTCACGGCAACCTCAAGCATGATATCTGATATTTGCATTCCATCAAAAGTGTTGAATGTCTTGAGTCAGAATAGCTGCAAAGAGGGACATGAACCATTTGTTTCATATGAAGGTCTTGAGCAGTTGCACCGCTTCATCTTTGTCATGGCAGTAACACATGTATCTTACAGCTGCTTAACTATGTTGCTGGCAATTGTGAAGATTCACAGTTGGAGGGAATGGGAGGATGAAGCTCATAGGGACCGGCATGATGTATTGACTGACATCACGAGAGAGTTGACAATACGAAGGCAATCAACCTTTGTCAAATTTCATACATCAAATCCTTTGGTCAGGAATAATTTTCTTATTTGGGTGACCTGTTTCTTCCGACAATTTGGGCGTTCGGTGGTTCGTGCTGACTACCTTACTCTCCGCAAGGGTTTCATAATGAATCACAACCTCACACTAAAATATGATTTTCACAGCTATATGATTCGCTCTATGGAAGAGGAATTCCAAATGATAGTTGGTGTGAGTGGCCCATTGTGGGGATTTGTTGTCGTATTTATGCTGTTCAATATAAGAGGGTCAAATCTCTATTTCTGGATAGCCATGATTCCCATTACTCTTGTTCTTCTGGTGGGCACAAAGCTGCAACATGTTATTGCAACCTTGGCATTGGAGAATGCTGGCATAACTGGATTTTTCGCAGGAGCAAAGTTAAAGCCTCGAAATGATCTTTTTTGGTTTAAGAAGCCAGAACTATTGTTGTTCTTAATCCATTTTATTCTATTCCAGAACGCGTTTGAGCTGGCTTCATTTTTTTGGTTTTGGTGGCAGTTCGGTTATGATTCTTGCTTTATTAAGAAACATACACTGGTCTACATGCGGCTGATTTTGGGGTTCGCTGGACAGTTCCTTTGCAGCTATAGCACTTTGCCACTATATGCACTGGTTACTCAGATGGGAACAAACTATAAGGCAGCCTTAATTCCACACAGAATAAGAGAGACAATTCATGGATGGGGGAAAGCGGCTAGGAGGAAGAGAAGGCTTGGTATGTTCACAGACGATTCTACCATACACACGGACACAAGCACGGTAATGTCAGTTGAGGAAGATGATAACCGGTTGTTCGATACCCCTGAAACTGTCCATCGTGGGTGCATGGAAATCGAGATACCACCTGCTTCTCATATTACATTGGATCCTTCCCCTGTGGCTAACGAAACCTCAAGTCGGGCTGGTACACCTCTTCTTCGACCCTCTGCTTCTGTTTCAGCATCAGTCGCATTGCACCTTCACCCAGAAGGTACTCTAAGATCCTCCTCAAATACTCTAAGATCCTCCTCAATGCCTATTAGTAGAGAATGA 1572 42.88 MAENEKETRSLALTPTWSVALVLSIFVAVSLLVERSIHRLSNWLRKTSRKPLLEAVEKMKEELMLLGFISLLLTATSSMISDICIPSKVLNVLSQNSCKEGHEPFVSYEGLEQLHRFIFVMAVTHVSYSCLTMLLAIVKIHSWREWEDEAHRDRHDVLTDITRELTIRRQSTFVKFHTSNPLVRNNFLIWVTCFFRQFGRSVVRADYLTLRKGFIMNHNLTLKYDFHSYMIRSMEEEFQMIVGVSGPLWGFVVVFMLFNIRGSNLYFWIAMIPITLVLLVGTKLQHVIATLALENAGITGFFAGAKLKPRNDLFWFKKPELLLFLIHFILFQNAFELASFFWFWWQFGYDSCFIKKHTLVYMRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPHRIRETIHGWGKAARRKRRLGMFTDDSTIHTDTSTVMSVEEDDNRLFDTPETVHRGCMEIEIPPASHITLDPSPVANETSSRAGTPLLRPSASVSASVALHLHPEGTLRSSSNTLRSSSMPISRE* 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3076913 3091784 - Vvi19g246 Vvi19g246 781745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g246 523 PANTHER MLO-LIKE PROTEIN 11 4 92 - -
Vvi19g246 523 MobiDBLite consensus disorder prediction 503 523 - -
Vvi19g246 523 MobiDBLite consensus disorder prediction 470 486 - -
Vvi19g246 523 PANTHER MLO-LIKE PROTEIN 11 91 478 - -
Vvi19g246 523 PANTHER MLO-LIKE PROTEIN 1 91 478 IPR004326 GO:0006952|GO:0016021
Vvi19g246 523 Pfam Mlo family 9 91 IPR004326 GO:0006952|GO:0016021
Vvi19g246 523 Pfam Mlo family 90 426 IPR004326 GO:0006952|GO:0016021
Vvi19g246 523 PANTHER MLO-LIKE PROTEIN 1 4 92 IPR004326 GO:0006952|GO:0016021
Vvi19g246 523 MobiDBLite consensus disorder prediction 504 523 - -
Vvi19g246 523 MobiDBLite consensus disorder prediction 466 486 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g246 K08472 - vvi:100233066 994.571