Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g292 ATGAATTTGGTCATAAATCATCGCCACAGCAGTTATGGCACTCCTTTTTGCAAATTCTCAAGCCACAAACATGAGACTGGCAAATATAAGGTGCCCGTCAGAGTGCCTAAGAGGTCTGCCATGGCTGAGGATCTTACCCAAGATATTGTATCATTGTCAAAGACTGAAAAAAGTGGCAGCTTTCTAATTAAGACAGCTGCAACTTCCTCTGCATTTGCAGCAGCAAATTTTTTTGCAACAACAGACATGGCAAAGGCTGCAAATATAAAGGATATATTGGAAGGGGCTACTTCTGTTTATACTTTGGCCGATGGGAGCATTGGAGATTGGTTTGGAGGCTTCCTATATTCAGCTGGACAACAGGCTAATGCAGCTGTTCAGGACCAGTTGTCAGCTCTCAGTTTCACTAGTTTGGCAGTTATATTTGGGGCAGGTCTTGTAACCAGCCTTTCTCCTTGTACATTAAGTGTCTTACCACTGACCCTTGGTTACATTGGAGCATTTGGCTCGGGGAAAGGCAGAGCAGAGGTCATTGGGAATTCAGTTGCATTCTCTTTAGGATTGGCAACAACACTAGCAATCTTGGGTGTAGCAGCCTCATTCGCAGGAAAGGCATATGGACAGATAGGACAGGGACTACCTTTGGCTGCTTCTGGTTTGGCTGTTATTATGGGTCTTAATCTCCTTGAGATAATTGAACTACAACTTCCCTCATTTTTTAACAACTTTGACCCCCGTTCTGCTGCGGCTAATCTCCCTTCAAGTGTGCAAGCTTACTTGGCCGGGCTTACGTTTGCATTAGCTGCCTCACCTTGCAGTACGCCTGTGCTGGCTACTCTACTTGGATATGTTGCTACATCAAAGGATCCAGTGATTGGAGGCAGCTTACTTTTGACATACACGACTGGCTATGTTGCTCCTCTACTTCTTGCTGCTTCTTTTGCTGGAGCATTGCAGAGCCTGCTTTCGTTCCGCAAGTTCTCAGCATGGATTAACCCAACCAGTGGTGCACTTCTGCTAGGTGGGGGAATCTACACTCTCTTGGATAGGCTTTTCCCTACCTCAATGGTCATGTAG 1077 45.68 MNLVINHRHSSYGTPFCKFSSHKHETGKYKVPVRVPKRSAMAEDLTQDIVSLSKTEKSGSFLIKTAATSSAFAAANFFATTDMAKAANIKDILEGATSVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPTSGALLLGGGIYTLLDRLFPTSMVM* 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3658551 3664452 - Vvi19g292 Vvi19g292 781791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g292 358 Pfam Cytochrome C biogenesis protein transmembrane region 141 348 IPR003834 GO:0016020|GO:0017004
Vvi19g292 358 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 54 358 - -
Vvi19g292 358 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 54 358 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g292 - - vvi:100245228 674.085