Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g298 ATGGGAACTGGGAAATACACCATGGGGAATGAGCTGTGGTATGGACCTGACAGAGTGAAGTATTTGGGACCCTTCTCAGCTCAGACTCCCTCGTACCTGACTGGAGAATTTCCAGGAGACTATGGATGGGACACCGCTGGATTGTCTGCTGATCCTGAGGCCTTTGCCAGGAACAGGGCTCTTGAGGTGATCCACGGGCGTTGGGCTATGCTTGGAGCACTGGGCTGCATCACCCCAGAAGTCCTTGAGAAGTGGCTTAGAGTGGACTTCAAAGAACCAATCTGGTTCAAAGCTGGAGCTCAAATCTTCTCCGAGGGCGGCCTGGACTACTTGGGCAACCCCAACCTTGTTCATGCCCAGAGCATTCTGGCAGTCCTCGGCTTCCAAGTTGTCCTCATGGGTCTTGTTGAGGGCTTCCGCATTAATGGCCTTCCTGGAGTTGGAGATGGCAACAACCTGTACCCTGGTGGACAATACTTCGATCCTCTTGGCCTCGCTGATGACCCGGTCACATTTGCTGAGCTCAAGGTCAAGGAAATCAAGAATGGACGGCTAGCCATGTTCTCCATGTTTGGCTTCTTTGTCCAAGCTATTGTGACCGGAAAAGGCCCCCTTGAGAACCTCTTGGACCACCTTGACAACCCAGTTGCTAATAACGCATGGGTCTACGCCACCAAGTTTGTGCCTGGATCTTAG 696 52.73 MGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3777345 3779258 - Vvi19g298 Vvi19g298 781797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g298 231 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 231 - -
Vvi19g298 231 Pfam Chlorophyll A-B binding protein 30 197 IPR022796 -
Vvi19g298 231 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 231 IPR001344 GO:0009765|GO:0016020
Vvi19g298 231 SUPERFAMILY Chlorophyll a-b binding protein 12 228 - -
Vvi19g298 231 Gene3D Chlorophyll a/b binding protein domain 20 224 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi12g680 Vvi19g298 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g298 K08914 - vvi:100260599 484.182