Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g458 ATGAAGATACCATGGAATATTGTACTATTCTCTTGTGTATTACTCTTCTATATTTCTCCTAAGGTTCAAGTCTGTCGAGGACAAGACGAAGATATCGACGCGCCACCACCTCTGCCACTGGAAGAAGAAGAATGCAACGGAATATTCCTGTCCTACACTTTCATATCGCGACAGAAGGCATTCCCACGACTGAAGAATGCATCAGCGCAGGCTTGGGCTTTTAAGTCCACCGCCACGGTGATGAATACAGGGTTAGATGAGTTGAAGGCATGGAAGATATTTATAGGGTTTCAGCATGAGGAGATATTGGTGAGTGCAGATGGGGCTGTTATAGCAGATGGGGATGATTTTCCGGCGGCGGTCGGGAACGGGACCTACTTGTCGGGGTATCCGCAGGCGGATTTAAAGACCTCTGTTGAGACTGCAAGTGATTTGAATCAGATGCAGGTGCAGATTCCGATGACTGGGACGCAGTTCGGGTTGAAGCCTCCGGCAGTTCCTATGCCAAGGACTATAAGGCTTGAAAATGATGGATATAAATGCCCTAATCCTACTCGTCGTGGGAGCTCAATGCATGTATGCTGTGCAAAGGATCCAAAATACAAGGCCAGAGAGGAAAAATCAACGAAGTTCTCGCCTCGACGGAACGGTGATCTCTCCTTCTCTTACGATGTCCTCCAAGCCTCGGACAGCAACTATCTTGCCCAAGTAACCATTGATAACAAAAACCCTATTGGCCGTCTGGACCATTGGAACTTAACTTGGGAGTGGATGAGAGGAGAGTTCATATACAACATGAGAGGAGCCTTCACTCGTAAAAAGGACAGCTCAGAATGCATATACGGGGAAGCCGGACAGTACTACAAAACCTTTGATTTCTCTGCTGTCATGAACTGCGAGAAAAGACCAGTCATTGTAGACCTGCCTGCTGATAGAGCAAAGGATGAGAAAGTTGGGAACTTACCATATTGCTGTAGAAATGGCAGTCTTCTACCGAGCACCATGGACGTGAGCAGATCAAGATCCGTTTTCCAATTACAAGTTTACAAGCTTCCACCTGACCTGAATCGAACCGCTCTTTTCCCACCCCAGAACTGGGAAGTTGACGGCGTTCTTAATCCACATTACAAGTGTGGCCCTCCTATTAGAGTAGACCCAACAGAATTTCCAGAACCGAGCGGCCTTCAGTCTACCGTTATAGCCGTGGCAAGTTGGCAAGTGGTCTGCAACATCACTCGCCCTCGAGCCAAGCATTCCAGATGTTGCGTTTCCTTTTCCGCCTTCTACAATGATTCCGTTGTGCCCTGCAACACCTGCGCTTGCGGCTGTGAGGAATCAGACACTTGCAGTGCCGACGCCAACCCTTTGCTCCTCCCTTCGGAGGCTCTGCTTGTGCCCTTTGACAATAGAACAGCCAGAGCAAAAGCTTGGGCTAAAGTTAAACACTATCCTGTTCCAGATCCATTGCCTTGTCCGGACAATTGTAGGGTTAGCATTAATTGGCACATCTATACTGATTACAGGACTGGATGGACCGCCCGGATTTCAATCTTCAATTGGGATGATGTGATTTTTGAGGACTGGTTTGGAGCAATTGTGATGGAGAAAACTTATCCTGGTTATGAAAATGTGTACTCATTCAATGGGACCAAGCTGCCACAGCTCAACAATACCATCTTCTTTGAAGGCTTACCAGGTCTGAACTACTTAATGGGAGAGACAAATGGGACTAACCCGAAACGTGATCCAAGAGTACCTGGAAAGCAGCAGTCAATAATTTCATTTACCAAGAAACAGACGCCGGGGATCAATTTAGCTAGAGGGGATGGATTTCCTTCACGGGTGTTCTTCAATGGGGAAGAATGCTCTCTTCCTGCACAGCTTCCCTTGAGAGGAGGGCAAAGTCGAACTCATGTCAGCTTCTTGCCAGTGGTTTTCCTCACAGTGTACAACATATGA 1959 47.37 MKIPWNIVLFSCVLLFYISPKVQVCRGQDEDIDAPPPLPLEEEECNGIFLSYTFISRQKAFPRLKNASAQAWAFKSTATVMNTGLDELKAWKIFIGFQHEEILVSADGAVIADGDDFPAAVGNGTYLSGYPQADLKTSVETASDLNQMQVQIPMTGTQFGLKPPAVPMPRTIRLENDGYKCPNPTRRGSSMHVCCAKDPKYKAREEKSTKFSPRRNGDLSFSYDVLQASDSNYLAQVTIDNKNPIGRLDHWNLTWEWMRGEFIYNMRGAFTRKKDSSECIYGEAGQYYKTFDFSAVMNCEKRPVIVDLPADRAKDEKVGNLPYCCRNGSLLPSTMDVSRSRSVFQLQVYKLPPDLNRTALFPPQNWEVDGVLNPHYKCGPPIRVDPTEFPEPSGLQSTVIAVASWQVVCNITRPRAKHSRCCVSFSAFYNDSVVPCNTCACGCEESDTCSADANPLLLPSEALLVPFDNRTARAKAWAKVKHYPVPDPLPCPDNCRVSINWHIYTDYRTGWTARISIFNWDDVIFEDWFGAIVMEKTYPGYENVYSFNGTKLPQLNNTIFFEGLPGLNYLMGETNGTNPKRDPRVPGKQQSIISFTKKQTPGINLARGDGFPSRVFFNGEECSLPAQLPLRGGQSRTHVSFLPVVFLTVYNI* 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5992671 5995863 + Vvi19g458 Vvi19g458 781957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g458 652 Pfam COBRA-like protein 233 412 IPR006918 GO:0010215|GO:0031225
Vvi19g458 652 PANTHER COBRA-LIKE PROTEIN 7 2 649 - -
Vvi19g458 652 PANTHER COBRA-LIKE PROTEIN 10 2 649 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g458 - - vvi:100243454 1345.1