Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi19g471 | ATGCTGATCTCCTGGGCTACTAGGATCGCTGAAACTCCTAAGACTGATTTTGCGTTTTGGAAGACCCTTTTTCCTGTTGCTGTGGCTCATACAATTGGGCATGTGGCTGCAACAGTGAGTATGTCCAAGGTTGCGGTGTCTTTTACTCACATAATCAAGAGTGGTGAGCCTGCATTCAGTGTCTTAGTTTCAAGGTTCCTATTGGGTGAGAGTTTTCCAACTTCGGTGTACTTCTCGCTCATTCCAATCATCGGAGGTTGTGCTCTGGCCGCCGTCACCGAGCTGAACTTCAACATGATTGGTTTTATGGGAGCCATGATTTCGAACCTGGCTTTTGTTTTTCGCAACATATTTTCAAAGAGAGGCATGAAGGGGAAGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCTATAATGTCACTGTTAATTCTCACCCCGTTCGCAATTGCTGTCGAGGGACCACAGATGTGGGCTGCTGGATGGCAAAATGCCGTTTCTCAAATTGGACCCCATTTCGTATGGTGGGTGGCGGCCCAGAGTGTATTCTATCACCTCTACAATCAGGTGTCATACATGTCGCTGGATGAGATCTCTCCCTTGACGTTTAGCATTGGAAACACCATGAAGCGTATATCTGTCATAGTCTCCTCAATCATCATCTTCCACACACCCGTCCAGCCCATCAATGCTCTTGGAGCTGCCATCGCAATCCTTGGAACTTTCTTGTATTCTCAGGCAAAGCAGTGA | 750 | 46.67 | MLISWATRIAETPKTDFAFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPTSVYFSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSIMSLLILTPFAIAVEGPQMWAAGWQNAVSQIGPHFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* | 250 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 6153027 | 6157170 | + | Vvi19g471 | Vvi19g471 | 781970 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi19g471 | 249 | Pfam | Triose-phosphate Transporter family | 1 | 245 | IPR004853 | - | |
| Vvi19g471 | 249 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 148 | 246 | - | - | |
| Vvi19g471 | 249 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 1 | 248 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 | |
| Vvi19g471 | 249 | PANTHER | GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC | 1 | 248 | - | - | |
| Vvi19g471 | 249 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 5 | 92 | - | - | |
| Vvi19g471 | 249 | PANTHER | SOLUTE CARRIER FAMILY 35 | 1 | 248 | - | - |
Event-related genes
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi19g471 | K15283 | - | vvi:100258996 | 472.241 |